DNA Binding Motif

						

			
Accessions: 1gat_A (3D-footprint 20231221)

			
Names: ERYTHROID TRANSCRIPTION FACTOR GATA-1
Organisms: Gallus gallus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: SOLUTION STRUCTURE OF THE SPECIFIC DNA COMPLEX OF THE ZINC CONTAINING DNA BINDING DOMAIN OF THE ERYTHROID TRANSCRIPTION FACTOR GATA-1 BY MULTIDIMENSIONAL NMR
Length: 5
Consensus: AGATA
Weblogo: 
PSSM: P0      A      C      G      T
01     96      0      0      0      A
02      9      7     73      7      G
03     73      9      7      7      A
04      9      7      7     73      T
05     73      7      9      7      A
Binding TFs: 1gat_A (GATA zinc finger)
Binding Sites: 1gat_B
1gat_C
			
Publications: Omichinski J. G., Clore G. M., Schaad O., Felsenfeld G., Trainor C., Appella E., Stahl S. J., Gronenborn A. M. NMR structure of a specific DNA complex of Zn-containing DNA binding domain of GATA-1.. Science 261:438-446 (1993). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.