DNA Binding Motif

						

			
Accessions: MA0108.1 (JASPAR 2024), POL012.1 (JASPAR 2024)

			
Names: TBP, TATA-Box
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 15
Consensus: sTATAWAwrssssss
Weblogo: 
PSSM: P0      A      C      G      T
01     61    145    152     31      s
02     16     46     18    309      T
03    352      0      2     35      A
04      3     10      2    374      T
05    354      0      5     30      A
06    268      0      0    121      W
07    360      3     10      6      A
08    222      2     44    121      w
09    155     44    157     33      r
10     56    135    150     48      s
11     83    147    128     31      s
12     82    127    128     52      s
13     82    118    128     61      s
14     68    107    139     75      s
15     77    101    140     71      s
			
Publications: Bucher P. Weight matrix descriptions of four eukaryotic RNA polymerase II promoter elements derived from 502 unrelated promoter sequences. J. Mol. Biol. 212:563-578 (1990). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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