DNA Binding Motif

						

			
Accessions: M0656 (AthalianaCistrome v4_May2016)

			
Names: ANAC020.DAP, T01798;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: TTrCKTGttyhaCAmGywAyc
Weblogo: 
PSSM: P0      A      C      G      T
01     12      0      0    588      T
02     86      5     88    421      T
03    168     83    200    149      r
04      0    600      0      0      C
05      0      0    155    445      K
06      0      0      0    600      T
07     30    103    450     17      G
08    120    116     34    330      t
09    146    115    137    202      t
10    142    186    105    167      y
11    160    167     84    189      h
12    327     30    121    122      a
13      0    497     19     84      C
14    600      0      0      0      A
15    259    340      0      1      m
16      2      1    578     19      G
17     63    176     44    317      y
18    241    106      0    253      w
19    492      1      0    107      A
20    100    254     54    192      y
21     53    366     71    110      c
Binding TFs: T01798 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.