DNA Binding Motif

						

			
Accessions: ATF6B_4 (HT-SELEX2 May2017), UN0110.1 (JASPAR 2024)

			
Names: ATF6B
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1, JASPAR 2024 2
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 12
Consensus: grTGACGTCAyc
Weblogo: 
PSSM: P0      A      C      G      T
01   2600   2888  10243   3409      g
02   9600   2126   9541    446      r
03      0     98    122  19141      T
04      0    166  19141    352      G
05  19141    130     57      0      A
06      7  19146      7      0      C
07      9      0  19141     18      G
08     23    326    115  19141      T
09    305  19141    156      0      C
10  19141    130    112      9      A
11    479   9492   2263   9649      y
12   3267  10243   3052   2580      c
Type: Heterodimer
Binding TFs: ATF6B (bZIP transcription factor, Basic region leucine zipper)
Q99941 (bZIP transcription factor, Basic region leucine zipper)
Q99941
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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