DNA Binding Motif

Accessions: MA0489.1 (JASPAR 2024)
Names: JUN, JUN(var.2)
Organisms: Homo sapiens, Rattus norvegicus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 14
Consensus: rrrrrrTGAsTCAt
Weblogo:
PSSM: P0 A C G T
01 4852 1250 2818 2036 r
02 3927 1324 4110 1595 r
03 3726 1127 4330 1773 r
04 4396 1122 3461 1977 r
05 4146 593 4213 2004 r
06 5930 993 4033 0 r
07 0 0 0 10956 T
08 0 0 10956 0 G
09 10953 0 0 3 A
10 382 5704 4090 780 s
11 199 0 0 10757 T
12 956 10000 0 0 C
13 10956 0 0 0 A
14 376 2509 2645 5426 t
Type: Heterodimer
Binding TFs: P05412 (bZIP transcription factor, Jun-like transcription factor, Basic region leucine zipper)
P05412
Binding Sites: MA0489.1.1
MA0489.1.10 / MA0489.1.13 / MA0489.1.17 / MA0489.1.18
MA0489.1.11
MA0489.1.12
MA0489.1.14
MA0489.1.15
MA0489.1.16
MA0489.1.19
MA0489.1.2
MA0489.1.20
MA0489.1.3
MA0489.1.4
MA0489.1.5
MA0489.1.6
MA0489.1.7
MA0489.1.8
MA0489.1.9
Publications: Li M, Ge Q, Wang W, Wang J, Lu Z. c-Jun binding site identification in K562 cells. Journal of genetics and genomics = Yi chuan xue bao 38:235-42 (2011). [Pubmed]

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