DNA Binding Motif

Accessions: MA1201.1 (JASPAR 2018)
Names: AGL42
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2018 1
1 [Pubmed]
Notes: DAP-seq
Length: 7
Consensus: CATCATy
Weblogo:
PSSM: P0 A C G T
01 0 146 0 0 C
02 146 0 0 0 A
03 0 12 0 134 T
04 0 146 0 0 C
05 146 0 0 0 A
06 0 0 0 146 T
07 17 73 16 40 y
Binding TFs: Q9FIS1 (SRF-type transcription factor (DNA-binding and dimerisation domain), K-box region)
Publications: Tang W., Perry S. E. Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study.. J. Biol. Chem. 278:28154-28159 (2003). [Pubmed]

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