DNA Binding Motif

Accessions: MA0415.1 (JASPAR 2024)
Names: YAP1
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 20
Consensus: mkktgmTTACGTAAkmycst
Weblogo:
PSSM: P0 A C G T
01 297 261 211 230 m
02 143 225 313 318 k
03 148 128 305 418 k
04 240 121 201 436 t
05 212 210 327 249 g
06 397 528 50 23 m
07 5 3 8 981 T
08 8 13 6 971 T
09 976 3 9 10 A
10 1 900 36 60 C
11 60 36 900 1 G
12 10 9 3 976 T
13 971 6 13 8 A
14 981 8 3 5 A
15 35 28 516 418 k
16 320 332 228 118 m
17 182 273 154 390 y
18 247 308 204 239 c
19 248 254 309 187 s
20 199 195 177 426 t
Type: Heterodimer
Binding TFs: P19880 (bZIP transcription factor, Transcription factor PAP1)
P19880
Publications: Newburger D.E, Bulyk M.L. UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic acids research 37:D77-82 (2009). [Pubmed]

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