DNA Binding Motif

Accessions: StCONSTANSlike1 (EEADannot 2022-05-31)
Names: StCONSTANSlike1
Organisms: Solanum tuberosum
Libraries: EEADannot 2022-05-31 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Length: 7
Consensus: TGTGGTG
Weblogo:
PSSM: P0 A C G T
01 0 0 1 5 T
02 0 0 5 1 G
03 0 0 0 6 T
04 0 0 6 0 G
05 0 0 5 1 G
06 0 0 1 5 T
07 0 1 5 0 G
Binding TFs: StCONSTANSlike1 (B-box zinc finger, CCT motif)
Binding Sites: StCONSTANSlike1_1
StCONSTANSlike1_2
StCONSTANSlike1_3
StCONSTANSlike1_4
StCONSTANSlike1_5
StCONSTANSlike1_6
Publications: Abelenda JA, Cruz-Oró E, Franco-Zorrilla JM, Prat S. Potato StCONSTANS-like1 Suppresses Storage Organ Formation by Directly Activating the FT-like StSP5G Repressor. Curr Biol 26:872-81 (2016). [Pubmed]

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