footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

Database 'UniPROBE 20160601' (Transcription Factors 551-600)

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Pages: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14

Accessions	Names	Organisms	Description and notes
UP00030A	1110038H03Rik, 6230403H02Rik, AI836553, end1, Sox-11, Sox11, SRY-box containing gene 11, factor SOX-11	Mus musculus	SRY-box containing gene 11
UP00101A	Sox-12, SOX-12 protein, Sox12, SRY-box containing gene 12	Mus musculus	SRY-box containing gene 12
UP00096A	AA407916, AW259412, AW540933, Sox-13, SOX-13 protein, Sox13, SRY-box containing gene	Mus musculus	SRY-box containing gene 13: nuclear factor of kappa light polypeptide enhancer in B-cells 2, p49/p100, mRNA (cDNA clone MGC:35934 IMAGE:3672913), complete cds
UP00004A	Sox-14, Sox14, SRY-box containing gene 14, Transcription factor SOX-14	Mus musculus	SRY-box containing gene 14: Mus musculus SRY-box containing gene 14,
UP00075A	Sox-15, SOX-15 protein, Sox15, SRY-box containing gene 15	Mus musculus	SRY-box containing gene 15
UP00014A	Sox-17, Sox17, SRY-box containing gene 17, Transcription factor SOX-17	Mus musculus	SRY-box containing gene 17
UP00064A	AI385749, Ra, Ragl, Sox-18, Sox18, SRY-box containing gene 18, Sry-related gene, Transcription factor SOX-18	Mus musculus	SRY-box containing gene 18
UP00071A	Sox21, SRY-box containing gene 21, Transcription factor SOX-21	Mus musculus	SRY-box containing gene 21
UP00023A	Sox30, SRY-box containing gene 30, Transcription factor SOX-30	Mus musculus	SRY-box containing gene 30: Mus musculus SRY-box containing gene 30
UP00062A	AA682046, Sox-4, Sox4, SRY-box containing gene 4, Transcription factor SOX-4	Mus musculus	SRY-box containing gene 4: Mus musculus BAC Clone 262c6 RPCI-23, sequence
UP00401A	ecotropic viral integration site 16, EVI16, OTTHUMP00000039358, Sox4, SRY (sex region Y)-box 4, SRY-related HMG-box gene 4, Transcription factor SOX-4	Homo sapiens	SRY (sex determining region Y)-box 4 : This intronless encodes a member of the SOX (SRY-related HMG-box) family of transcription factors involved in the regulation of embryonic development and in the determination of the cell fate. The encoded protein may act as a transcriptional regulator after forming a protein complex with other proteins, such as syndecan binding protein (syntenin). The protein may function
UP00091A	AI528773, MGC124352, Sox-5, Sox5, SRY-box containing gene 5, Transcription factor	Mus musculus	SRY-box containing gene 5
UP00034A	mSOX7, Sox-7, Sox7, SRY-box containing gene 7, Transcription factor SOX-7	Mus musculus	SRY-box containing gene 7
UP00051A	Sox-8, Sox8, SRY-box containing gene 8, Transcription factor SOX-8	Mus musculus	SRY-box containing gene 8: SRY-box containing gene 8, mRNA (cDNA MGC:78314 IMAGE:6306276), complete cds
UP00049A	nuclear antigen Sp100, Nuclear autoantigen Sp-100, Nuclear dot-associated Sp100 protein, Speckled 100 kDa	Mus musculus	nuclear antigen Sp100: PREDICTED: Mus musculus nuclear antigen Sp100 (Sp100)
UP00002A	5730497N03Rik, HF-1b, HF1-b, Sp4, trans-acting transcription factor 4, Transcription factor	Mus musculus	trans-acting transcription factor 4: Mus musculus similar to trans-acting transcription 4 (LOC211769), mRNA
UP00038A UP00406A	Prostate epithelium-specific Ets transcription factor, Prostate-derived Ets factor, Prostate-specific Ets, SAM pointed domain containing ets transcription factor, SAM pointed domain-containing Ets transcription factor, Spdef	Mus musculus	SAM pointed domain containing ets transcription factor: Mus musculus prostate ets transcription factor (Pse-pending), mRNA
UP00419A	AU019198, C76795, Prf, Pu.1-related factor, Spi-C transcription factor (Spi-1/PU.1 related), Transcription factor Spi-C	Mus musculus	Spi-C transcription factor (Spi-1/PU.1 related): transcription factor Spi-C
UP00337A	BTF1, Spt15, TATA sequence-binding protein, TATA-binding factor, TATA-box factor, TATA-box-binding TBP, TBP1, Transcription factor D, Transcription initiation factor TFIID TBP subunit, YER148W	Saccharomyces cerevisiae	TATA-binding protein, general transcription factor that interacts with other factors form the preinitiation complex at promoters, essential for viability
UP00502A UP00502B	S. purpuratus Tbrain (T-box transcription factor), SpTbr_rep1, SpTbr_rep2	Strongylocentrotus purpuratus	S. purpuratus Tbrain (T-box transcription factor)
UP00304A	Pre-rRNA-processing protein SRD1, Srd1, Suppressor of rRNA-processing defect protein 1, YCR18C	Saccharomyces cerevisiae	Protein involved in the processing of pre-rRNA to mature rRNA; a C2/C2 zinc finger motif; srd1 mutation suppresses defects caused by the rrp1-1 mutation
UP00077A	AW049942, AW240594, serum response factor, Srf	Mus musculus	serum response factor
UP00016A	MGC129295, sex determining region of Chr Y, Sex-determining region Y Sry, Tdf, Tdy, Testis-determining factor	Mus musculus	sex determining region of Chr Y
UP00275A	"Protein STB3, SIN3-binding protein 3, Stb3, YD9489.04c, YDR169C"	Saccharomyces cerevisiae	Protein that binds Sin3p in a two-hybrid assay
UP00465A	Sin Three Binding protein, Stb4	Saccharomyces cerevisiae	Sin Three Binding protein : Putative transcription factor; contains a zinc finger domain characteristic of DNA-binding proteins; computational analysis suggests a role in regulation of expression of genes encoding transporters; binds Sin3p in a two-hybrid assay
UP00466A	Sin Three Binding protein, Stb5	Saccharomyces cerevisiae	Sin Three Binding protein : Transcription factor, involved in regulating resistance and oxidative stress response; forms a heterodimer with Pdr1p; contains a Zn(II)2Cys6 zinc finger domain that interacts with a pleiotropic drug resistance element in vitro
UP00467A	Ste12, STErile	Saccharomyces cerevisiae	STErile: Transcription factor that is activated by a MAP kinase cascade, activates genes involved in mating or pseudohyphal/invasive growth pathways; cooperates with Tec1p transcription factor to regulate genes specific for invasive growth
UP00468A	BAP1, Species-specific tRNA Processing, SSY2, Stp1	Saccharomyces cerevisiae	Species-specific tRNA Processing : Transcription factor, undergoes proteolytic processing by (Ssy1p-Ptr3p-Ssy5p)-sensor component Ssy5p in response to extracellular amino acids; activates transcription of amino acid permease genes and may have a role in tRNA processing
UP00338A	Stp2, YHR006W, Zinc finger protein STP2	Saccharomyces cerevisiae	Transcription factor, activated by proteolytic processing in response to signals the SPS sensor system for external amino acids; activates transcription of amino acid permease genes
UP00354A	Not Available, Stp4	Saccharomyces cerevisiae	Protein containing a Kruppel-type zinc-finger domain; has similarity to Stp1p, and Stp3p
UP00341A	D9740.19, Sum1, SUM1-1 protein, Suppressor of mar1-1 protein, YDR310C	Saccharomyces cerevisiae	Transcriptional repressor required for mitotic repression of middle sporulation-specific genes; in telomere maintenance, regulated by the pachytene checkpoint
UP00469A	Sterol UpTake, Sut1	Saccharomyces cerevisiae	Sterol UpTake : Transcription factor of the Zn[II]2Cys6 family involved sterol uptake; involved in induction of hypoxic gene expression
UP00297A	"LPZ9w, Sterol uptake protein 2, Sut2, YPR009W"	Saccharomyces cerevisiae	Putative transcription factor; multicopy suppressor of mutations that cause low of the cAMP/protein kinase A pathway; highly similar to Sut1p
UP00299A	LPI16C, Protein TBF1, TBF alpha, Tbf1, TTAGGG repeat-binding factor 1,	Saccharomyces cerevisiae	Telobox-containing general regulatory factor; binds to TTAGGG repeats within subtelomeric regions (STARs) and possibly throughout the genome and mediates their insulating capacity by...
UP00029A	GTF2D, GTF2D1, HDL4, MGC117320, MGC126054, MGC126055, SCA17, TATA sequence-binding protein, factor, TATA-box factor, TATA-box-binding protein, TBP, Transcription initiation factor TFIID TBP subunit	Homo sapiens	TATA-box-binding protein: Initiation of transcription by RNA polymerase II requires activities of more than 70 polypeptides. The protein that coordinates these activities is transcription factor IID (TFIID), which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the TATA-binding protein (TBP) and a group of evolutionarily conserved protein
UP00306A	Probable transcriptional regulatory protein YBR150C, Tbs1, YBR1133	Saccharomyces cerevisiae	Probable Zn-finger protein
UP00089A UP00390A	AI323641, hepatocyte nuclear factor 1, Hepatocyte nuclear factor 1-alpha, Hnf-1, HNF1, HNF1-alpha, HNF1[a], Hnf1a, Hnf1alpha, LFB1, Liver-specific transcription factor LF-B1, Tcf-1, Tcf1, transcription factor 1	Mus musculus	transcription factor 1: Mus musculus transcription factor 1 (Tcf1), mRNA.
UP00222A	AI385728, AI987804, Hepatocyte nuclear factor 1-beta, hepatocyte nuclear factor-1 beta, HNF-1beta, Hnf1b, Hnf1beta, Homeoprotein LFB3, Tcf-2, Tcf2, transcription factor 2, Variant hepatic nuclear factor 1, vHNF1	Mus musculus	transcription factor 2: TCF2 gene, VIRTUAL TRANSCRIPT, partial sequence, genomic sequence
UP00058A	HMG box transcription factor 3, mTCF-3, Tcf3, Tcf7l1, transcription factor Transcription factor 7-like 1	Mus musculus	transcription factor 3
UP00054A	AI465550, T cell factor-1, T-cell factor 1, T-cell specific, T-cell-specific factor 1, Tcf-1, Tcf1, Tcf7, Transcription factor 7	Mus musculus	Transcription factor 7, T-cell specific
UP00083A	HMG-box, T-cell specific, Tcf7l2, transcription factor 7-like 2	Mus musculus	transcription factor 7-like 2, T-cell specific, HMG-box
UP00005A	Activating enhancer-binding protein 2 alpha, Activator protein 2, alpha, Ap-2 AP-2 alpha, AP2-alpha, Ap2tf, Tcfap2a, Tfap2a, transcription factor AP-2, Transcription factor AP-2 alpha	Mus musculus	transcription factor AP-2, alpha: Mus musculus transcription factor AP-2, alpha,
UP00010A	Activating enhancer-binding protein 2 beta, AI606113, AP-2(beta), AP2-beta, E130018K07Rik, Tcfap2b, transcription factor AP-2 beta	Mus musculus	transcription factor AP-2 beta
UP00087A	AA409384, Activating enhancer-binding protein 2 gamma, Ap-2.2, AP2-gamma, gamma, Tcfap2c, transcription factor AP-2, Transcription factor AP-2 gamma	Mus musculus	transcription factor AP-2, gamma: Mus musculus transcription factor AP-2, gamma, (cDNA clone MGC:5992 IMAGE:3592762), complete cds
UP00028A	AI505200, AP-2e, epsilon, Tcfap2e, transcription factor AP-2	Mus musculus	transcription factor AP-2, epsilon
UP00046A	A1, AA408400, Alf2, AW209082, E12, E12/E47, Immunoglobulin enhancer-binding factor E12/E47, Pan1, Pan2, TCF-3, Tcf3, Tcfe2a, Transcription factor 3, Transcription factor A1, Transcription factor E2-alpha, transcription factor E2a, VDIR	Mus musculus	transcription factor E2a
UP00333A	O6257, Tea1, TY1 enhancer activator, YOR337W	Saccharomyces cerevisiae	Ty1 enhancer activator required for full levels of Ty enhancer-mediated C6 zinc cluster DNA-binding protein
UP00340A	ROC1, Tec1, Ty transcription activator TEC1, YBR0750, YBR083W	Saccharomyces cerevisiae	Transcription factor required for full Ty1 epxression, Ty1-mediated gene activation, haploid invasive and diploid pseudohyphal growth; TEA/ATTS DNA-binding domain family member
UP00122A	Not Available, TGFB-induced factor 2, Tgif1	Mus musculus	TGFB-induced factor 2
UP00258A	4921501K24, 5'-TG-3'-interacting factor 2, 5730599O09Rik, C80753, C81206, Homeobox protein TGIF2, family homeobox, TGF(beta)-induced transcription factor 2, TGFB-induced factor 2, Tgif2	Mus musculus	TGFB-induced factor 2

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.

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