footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

Database 'UniPROBE 20160601' (DNA Binding Motifs 651-700)

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Pages: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20

Accessions	Names	Consensus	Organisms
UP00615B_2	ALL1-responsive protein ARP1, Brx1, Homeobox protein PITX2, IDG2, IGDS, IGDS2, IRID2, MGC111022, MGC20144, Otlx2, Paired-like homeodomain transcription factor 2, pituitary homeobox 2, PITX2_L100Q_R1, PTX2, RGS, RIEG, RIEG bicoid-related homeobox transcription factor, RIEG1, RS, Solurshin	khysrwrrGGATTAAtwrkaCs	Homo sapiens
UP00615B_1	ALL1-responsive protein ARP1, Brx1, Homeobox protein PITX2, IDG2, IGDS, IGDS2, IRID2, MGC111022, MGC20144, Otlx2, Paired-like homeodomain transcription factor 2, pituitary homeobox 2, PITX2_L100Q_R2, PTX2, RGS, RIEG, RIEG bicoid-related homeobox transcription factor, RIEG1, RS, Solurshin	wkwraaaAgGGATTArTagtrrr	Homo sapiens
UP00615C_1	ALL1-responsive protein ARP1, Brx1, Homeobox protein PITX2, IDG2, IGDS, IGDS2, IRID2, MGC111022, MGC20144, Otlx2, Paired-like homeodomain transcription factor 2, pituitary homeobox 2, PITX2_R108H_R1, PTX2, RGS, RIEG, RIEG bicoid-related homeobox transcription factor, RIEG1, RS, Solurshin	mcgtmywATTAATCCyyhwrar	Homo sapiens
UP00615C_2	ALL1-responsive protein ARP1, Brx1, Homeobox protein PITX2, IDG2, IGDS, IGDS2, IRID2, MGC111022, MGC20144, Otlx2, Paired-like homeodomain transcription factor 2, pituitary homeobox 2, PITX2_R108H_R2, PTX2, RGS, RIEG, RIEG bicoid-related homeobox transcription factor, RIEG1, RS, Solurshin	gykwaaAcGGATTAaTmwtgmvw	Homo sapiens
UP00615D_1	ALL1-responsive protein ARP1, Brx1, Homeobox protein PITX2, IDG2, IGDS, IGDS2, IRID2, MGC111022, MGC20144, Otlx2, Paired-like homeodomain transcription factor 2, pituitary homeobox 2, PITX2_R130W_R1, PTX2, RGS, RIEG, RIEG bicoid-related homeobox transcription factor, RIEG1, RS, Solurshin	twyktwwmsTAATTAykmmcawa	Homo sapiens
UP00615A_1	ALL1-responsive protein ARP1, Brx1, Homeobox protein PITX2, IDG2, IGDS, IGDS2, IRID2, MGC111022, MGC20144, Otlx2, Paired-like homeodomain transcription factor 2, pituitary homeobox 2, PITX2_REF_R1, PTX2, RGS, RIEG, RIEG bicoid-related homeobox transcription factor, RIEG1, RS, Solurshin	kyysdtrgGGATTAAtwrkacs	Homo sapiens
UP00615A_2	ALL1-responsive protein ARP1, Brx1, Homeobox protein PITX2, IDG2, IGDS, IGDS2, IRID2, MGC111022, MGC20144, Otlx2, Paired-like homeodomain transcription factor 2, pituitary homeobox 2, PITX2_REF_R2, PTX2, RGS, RIEG, RIEG bicoid-related homeobox transcription factor, RIEG1, RS, Solurshin	kkkcwwtyTAATCCcyykmawm	Homo sapiens
UP00615E_1	ALL1-responsive protein ARP1, Brx1, Homeobox protein PITX2, IDG2, IGDS, IGDS2, IRID2, MGC111022, MGC20144, Otlx2, Paired-like homeodomain transcription factor 2, pituitary homeobox 2, PITX2_T114P_R1, PTX2, RGS, RIEG, RIEG bicoid-related homeobox transcription factor, RIEG1, RS, Solurshin	kwtkmrrkGGATTArawwkaamt	Homo sapiens
UP00265A_1	ak, Homeobox protein PITX3, paired-like homeodomain transcription factor 3, Pituitary 3, Pitx3, Ptx3	rggGGGATTAgCtrsc	Mus musculus
UP00203A_1	D17Wsu76e, Homeobox protein PKNOX1, Pbx/knotted 1 homeobox, PBX/knotted homeobox 1, PREP1	wrmsAsCTGTCAawmc	Mus musculus
UP00205A_1	D230005H23Rik, Pbx/knotted 1 homeobox 2, Pknox2, Prep2	aarsrsCTGTCAathy	Mus musculus
UP00088A_1	Lot1, Plagl1, Pleiomorphic adenoma gene-like 1, Zac1	kyggGGGssCCCckrs	Mus musculus
UP00088A_2	Lot1, Plagl1, Pleiomorphic adenoma gene-like 1, Zac1	rctgGGGGGTACccytw	Mus musculus
UP00501A_1 UP00501A_2	P. miniata Tbrain (T-box transcription factor), PmTbr_rep1	yskctrrAGGTGTGAAywwamst	Patiria miniata
UP00501A_3 UP00501A_4	P. miniata Tbrain (T-box transcription factor), PmTbr_rep1	mrwmhsCsAGGTGACAtawstsv	Patiria miniata
UP00501B_1 UP00501B_2	P. miniata Tbrain (T-box transcription factor), PmTbr_rep2	smsrsmrAGGTGYGAAmtwrdw	Patiria miniata
UP00501B_3 UP00501B_4	P. miniata Tbrain (T-box transcription factor), PmTbr_rep2	whyccgkAGGTGwygsymshcs	Patiria miniata
UP00158A_1	dw, dwarf, GHF-1, Growth hormone factor 1, Hmp1, Pit-1, Pit1, specific transcription factor 1, Pituitary-specific positive transcription factor 1, Pou1f1	rrwtAATTAATTAwgtc	Mus musculus
UP00254A_1	2810482H01Rik, class 2, NF-A1, oct-1, Oct-1A, Oct-1B, Oct-1C, Oct-1L, Oct-1z, transcription factor 1, Otf-1, Otf1, POU domain, Pou2f1, transcription factor 1	dtdwrwTAATTArktw	Mus musculus
UP00191A_1	class 2, Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2, MGC124154, MGC124155, MGC124156, Oct2, Oct2a, Oct2b, Octamer-binding transcription factor 2, Otf-2, Otf2, POU domain, Pou2f2, transcription factor 2	ywkTATGCWAATkara	Mus musculus
UP00179A_1	class 2, Epoc-1, Epoc1, Oct-11, Oct-11a, Oct11, Octamer-binding transcription factor Otf-11, Otf11, POU domain, Pou2f3, Skin, Skin-1a, Skn-1a, Skn-li, transcription factor 3	ttkTATGCWAATkara	Mus musculus
UP00129A_1	class 3, Oct-6, Oct6, Octamer-binding transcription factor 6, Otf-6, Otf6, domain, POU-domain transcription factor SCIP, Pou3f1, Test1, transcription factor 1, Tst-1, Tst1	rmyTAATTAATTAaktm	Mus musculus
UP00128A_1	9430075J19Rik, A230098E07Rik, Brain-2, Brain-specific homeobox/POU domain protein 2, Brn-2, Brn2, 3, Nervous system-specific octamer-binding transcription factor N-Oct-3, Otf7, POU domain, Pou3f2, Protein Brn-2, transcription factor 2	swtAaTTAATTArkkyr	Mus musculus
UP00211A_1	Brain-1, Brain-specific homeobox/POU domain protein 1, Brn-1, Brn-1 protein, Brn1, 3, Otf8, POU domain, Pou3f3, Skin1, transcription factor 3	wardTATGCATAwtdwa	Mus musculus
UP00105A_1	Brain-4, Brain-specific homeobox/POU domain protein 4, Brn-4, Brn4, class 3, POU domain, Pou3f4, Slf, transcription factor 4	rmttAATTAATTAadtc	Mus musculus
UP00616B_1	Brain-4, Brain-specific homeobox/POU domain protein 4, Brn-4, BRN4, class 3, DFNX2, Oct-9, Octamer-binding protein 9, Octamer-binding transcription factor 9, OTF-9, OTF9, POU domain, POU3F4_A237G_R1, transcription factor 4	hkwrythATTATGCRgayakhm	Homo sapiens
UP00616C_1	Brain-4, Brain-specific homeobox/POU domain protein 4, Brn-4, BRN4, class 3, DFNX2, Oct-9, Octamer-binding protein 9, Octamer-binding transcription factor 9, OTF-9, OTF9, POU domain, POU3F4_A312V_R1, transcription factor 4	kgacgyyyTAATTArwcrtcrr	Homo sapiens
UP00616D_1	Brain-4, Brain-specific homeobox/POU domain protein 4, Brn-4, BRN4, class 3, DFNX2, Oct-9, Octamer-binding protein 9, Octamer-binding transcription factor 9, OTF-9, OTF9, POU domain, POU3F4_R323G_R1, transcription factor 4	tkwryyhATTATGCrkryakhm	Homo sapiens
UP00616A_1	Brain-4, Brain-specific homeobox/POU domain protein 4, Brn-4, BRN4, class 3, DFNX2, Oct-9, Octamer-binding protein 9, Octamer-binding transcription factor 9, OTF-9, OTF9, POU domain, POU3F4_REF_R1, transcription factor 4	ykwrytwATTATGCAkaywkhm	Homo sapiens
UP00616E_1	Brain-4, Brain-specific homeobox/POU domain protein 4, Brn-4, BRN4, class 3, DFNX2, Oct-9, Octamer-binding protein 9, Octamer-binding transcription factor 9, OTF-9, OTF9, POU domain, POU3F4_V322M_R1, transcription factor 4	kgmcgyyyTAATTArwcakcrg	Homo sapiens
UP00118A_1	Brain-specific homeobox/POU domain protein 3C, Brn-3.1, Brn-3c, Brn3.1, Brn3c, class ddl, dreidel, POU domain, Pou4f3, transcription factor 3	wrtwATTAATkArkyc	Mus musculus
UP00617B_1	Brain-3C, Brain-specific homeobox/POU domain protein 3C, Brn-3C, BRN3C, class 4, MGC138412, POU domain, POU4F3_K277R_R1, transcription factor 3	twrmrtwTATTAATAwwbwtay	Homo sapiens
UP00617C_1	Brain-3C, Brain-specific homeobox/POU domain protein 3C, Brn-3C, BRN3C, class 4, MGC138412, POU domain, POU4F3_L289F_R1, transcription factor 3	ytddwwtTATGCATAwwadarw	Homo sapiens
UP00617D_1	Brain-3C, Brain-specific homeobox/POU domain protein 3C, Brn-3C, BRN3C, class 4, MGC138412, POU domain, POU4F3_N316K_R1, transcription factor 3	thravkTTATTAATAwtktmak	Homo sapiens
UP00617A_1	Brain-3C, Brain-specific homeobox/POU domain protein 3C, Brn-3C, BRN3C, class 4, MGC138412, POU domain, POU4F3_REF_R1, transcription factor 3	TawArtTTATTAATAhttwwab	Homo sapiens
UP00146A_1	2310038G18Rik, Brn5.0, C79593, class 6, Emb, Octamer-binding transcription factor EMB, domain, Pou6f1, transcription factor 1, Transcription regulatory protein MCP-1	vwmswTAATKAGstkgm	Mus musculus
UP00146A_2	2310038G18Rik, Brn5.0, C79593, class 6, Emb, Octamer-binding transcription factor EMB, domain, Pou6f1, transcription factor 1, Transcription regulatory protein MCP-1	rhasATAATGAGstkkc	Mus musculus
UP00618B_1	class 6, POU domain, POU6F2_E639K_R1, Retina-derived POU domain factor 1, RPF1, transcription factor 2, WT5, WTSL	wyhcgrgcTAATTAkcycarwaw	Homo sapiens
UP00618C_1	class 6, POU domain, POU6F2_L500M_R1, Retina-derived POU domain factor 1, RPF1, transcription factor 2, WT5, WTSL	twwmrybagcTAATTArbrywmt	Homo sapiens
UP00618A_1	class 6, POU domain, POU6F2_REF_R1, Retina-derived POU domain factor 1, RPF1, transcription factor 2, WT5, WTSL	wwvrybagcTAATTArkgywmt	Homo sapiens
UP00172A_1	df, Homeobox protein prophet of Pit-1, paired like homeodomain factor Pituitary-specific homeodomain factor, Prop-1, Prop1, prophet of Pit1	cgmrTTAATTAAkwdac	Mus musculus
UP00619B_1	homeobox protein prophet of Pit-1, Pituitary-specific homeodomain factor, PROP-1, PROP1_R112Q_R1	rwrtdTwwtyyAATTArkwywaw	Homo sapiens
UP00619C_1	homeobox protein prophet of Pit-1, Pituitary-specific homeodomain factor, PROP-1, PROP1_R99Q_R1	AwgtwTAATyTAATTAwtwkwg	Homo sapiens
UP00619A_1	homeobox protein prophet of Pit-1, Pituitary-specific homeodomain factor, PROP-1, PROP1_REF_R1	wAytkTAATywAATTAkyTdag	Homo sapiens
UP00266A_1	A230024N07Rik, AA755424, AI385634, AI843499, Homeobox protein K-2, Homeobox protein mHox, mesoderm homeobox protein 1, paired related homeobox 1, Paired-related homeobox protein 1, Pmx, Pmx1, Prrx1, PRX-1, Prx1	vkaayTAATTAryTast	Mus musculus
UP00136A_1	Homeobox protein S8, Paired mesoderm homeobox protein 2, paired related 2, Prrx2, PRX-2, Prx2	wvmrYTAATTARygrwr	Mus musculus
UP00508A_1	CG1447, D-Ptx1, Dmel\CG1447, Paired-type homeobox 1, Pituitary homeobox homolog Ptx1,	wcctrrvGGGATTAAktrtcms	Drosophila melanogaster
UP00335A_1	"Proline utilization trans-activator, Put3, YKL015W"	atyvmkaTCCCGGgawkkbt	Saccharomyces cerevisiae
UP00321A_1	"DNA-binding protein RAP1, GRF1, N1310, Rap1, Repressor/activator site-binding protein, SBF-E, TUF, TUF1, YNL216W"	rkgtyrkGGTGTACgGrtat	Saccharomyces cerevisiae
UP00398A_1	"DNA-binding protein RAP1, GRF1, N1310, Rap1, Repressor/activator site-binding protein, SBF-E, TUF, TUF1, YNL216W"	yktwcrCCCgtACACCCcrdaam	Saccharomyces cerevisiae

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.

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