footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

Database 'UniPROBE 20160601' (DNA Binding Motifs 451-500)

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If you want to search for a protein sequence or a DNA motif use the Sequence Search Form.

Pages: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20

Accessions	Names	Consensus	Organisms
UP00169A_1	LIM homeobox transcription factor 1 beta, LIM-homeobox protein 1.2, LIM/homeobox LMX1B, LMX-1.2, LMX1.1, LMX1.2, Lmx1b	rrwwwTTAATTAAtwyb	Mus musculus
UP00552A_1	LUX, LUX ARRHYTHMO, PCL1, PHYTOCLOCK 1, Transcription factor LUX	kawAGATwCGstkw	Arabidopsis thaliana
UP00552A_2	LUX, LUX ARRHYTHMO, PCL1, PHYTOCLOCK 1, Transcription factor LUX	kwwAGATwCGstww	Arabidopsis thaliana
UP00552A_3	LUX, LUX ARRHYTHMO, PCL1, PHYTOCLOCK 1, Transcription factor LUX	kmwAGATwCGswtw	Arabidopsis thaliana
UP00552A_4	LUX, LUX ARRHYTHMO, PCL1, PHYTOCLOCK 1, Transcription factor LUX	tbywAGATwYksyk	Arabidopsis thaliana
UP00552A_5	LUX, LUX ARRHYTHMO, PCL1, PHYTOCLOCK 1, Transcription factor LUX	khaAGATwYgstka	Arabidopsis thaliana
UP00552A_6	LUX, LUX ARRHYTHMO, PCL1, PHYTOCLOCK 1, Transcription factor LUX	kwaAGATwygstka	Arabidopsis thaliana
UP00282A_1	Lys14, Lysine biosynthesis regulatory protein LYS14, YD9673.04C, YDR034C	ywcymrAAATTCCGkkckhy	Saccharomyces cerevisiae
UP00045A_1	kr, Kreisler, Krml, Krml1, Maf1, Mafb, protein B (avian), Segmentation KR, Transcription factor MAF1, Transcription factor MafB, v-maf musculoaponeurotic fibrosarcoma oncogene family, V-maf musculoaponeurotic fibrosarcoma oncogene homolog B	aawwkTGCTGACwwarm	Mus musculus
UP00045A_2	kr, Kreisler, Krml, Krml1, Maf1, Mafb, protein B (avian), Segmentation KR, Transcription factor MAF1, Transcription factor MafB, v-maf musculoaponeurotic fibrosarcoma oncogene family, V-maf musculoaponeurotic fibrosarcoma oncogene homolog B	maatTGCAaAAwwrt	Mus musculus
UP00044A_1	AW061068, Erythroid transcription factor NF-E2 p18 subunit, Mafk, Nfe2u, p18 protein K (avian), Transcription factor MafK, v-maf musculoaponeurotic fibrosarcoma oncogene family	wwAAwwTGCTGACtt	Mus musculus
UP00044A_2	AW061068, Erythroid transcription factor NF-E2 p18 subunit, Mafk, Nfe2u, p18 protein K (avian), Transcription factor MafK, v-maf musculoaponeurotic fibrosarcoma oncogene family	raaAAAAkTGCAmsr	Mus musculus
UP00429A_1	MAL8P1.153, None, putative, transcription factor with AP2 domain(s)	thdwrwryACACACayyyrrrw	Plasmodium falciparum
UP00480A_7 UP00484A_7 UP00485A_3	hN1, MAML1-CSL-GST-NOTCH1_Fig2, Neurogenic locus notch homolog protein 1, notch 1, Translocation-associated notch protein TAN-1, CBF1, IGKJRB, IGKJRB1, KBF2, MGC61669, RBP-J, RBPJ, RBPJK, RBPSUH, recombination signal binding protein for immunoglobulin kappa J region, SUH, FLJ53540, KIAA0200, Mam-1, Mam1, MAML 1, MAML-1, mastermind-like 1 (Drosophila)	yykrcaycgTGGGAACcvcdwtg	Homo sapiens
UP00480A_6 UP00484A_6 UP00485A_2	hN1, MAML1-CSL-GST-NOTCH1_Fig5, Neurogenic locus notch homolog protein 1, notch 1, Translocation-associated notch protein TAN-1, CBF1, IGKJRB, IGKJRB1, KBF2, MGC61669, RBP-J, RBPJ, RBPJK, RBPSUH, recombination signal binding protein for immunoglobulin kappa J region, SUH, FLJ53540, KIAA0200, Mam-1, Mam1, MAML 1, MAML-1, mastermind-like 1 (Drosophila)	yckwwhscrTGGGAAmywkwkrg	Homo sapiens
UP00481A_2 UP00484A_9 UP00485A_5	AGS2, HJCYS, hN2, MAML1-CSL-GST-NOTCH2_Fig5, notch 2, CBF1, IGKJRB, IGKJRB1, KBF2, RBP-J, RBPJ, RBPJK, RBPSUH, recombination signal binding protein for immunoglobulin kappa J region, SUH, FLJ53540, KIAA0200, Mam-1, Mam1, MAML 1, MAML-1, mastermind-like 1 (Drosophila)	cwckwwwsCrTGGGAAmhwktkd	Homo sapiens
UP00481A_1 UP00484A_8 UP00485A_4	AGS2, HJCYS, hN2, MAML1-CSL-GST-NOTCH2_FigS1, notch 2, CBF1, IGKJRB, IGKJRB1, KBF2, RBP-J, RBPJ, RBPJK, RBPSUH, recombination signal binding protein for immunoglobulin kappa J region, SUH, FLJ53540, KIAA0200, Mam-1, Mam1, MAML 1, MAML-1, mastermind-like 1 (Drosophila)	tmkrmaycvTGGGAAccmbdwkg	Homo sapiens
UP00482A_1 UP00484A_10 UP00485A_6	CADASIL, CASIL, IMF2, MAML1-CSL-GST-NOTCH3, notch 3, CBF1, IGKJRB, IGKJRB1, KBF2, RBP-J, RBPJ, RBPJK, RBPSUH, recombination signal binding protein for immunoglobulin kappa J region, SUH, FLJ53540, KIAA0200, Mam-1, Mam1, MAML 1, MAML-1, mastermind-like 1 (Drosophila)	yyckwwhsCgTGGGAAmywytkd	Homo sapiens
UP00483A_1 UP00484A_11 UP00485A_7	FLJ16302, INT3, MAML1-CSL-GST-NOTCH4, MGC74442, notch 4, CBF1, IGKJRB, IGKJRB1, KBF2, RBP-J, RBPJ, RBPJK, RBPSUH, recombination signal binding protein for immunoglobulin kappa J region, SUH, FLJ53540, KIAA0200, Mam-1, Mam1, MAML 1, MAML-1, mastermind-like 1 (Drosophila)	tykrmwhcvTGGGAAccmswadg	Homo sapiens
UP00307A_1	Matalpha2, Not Available	htdtwrAACAATAGwmytmc	Saccharomyces cerevisiae
UP00060A_1	AA960152, AI875693, Max, Max protein, Myc-associated factor X, Myc-binding novel protein, Myn, Protein max, Protein myn	kgmsCACGTGgkcrkk	Mus musculus
UP00060A_2	AA960152, AI875693, Max, Max protein, Myc-associated factor X, Myc-binding novel protein, Myn, Protein max, Protein myn	ktGyCAyGcGaCdk	Mus musculus
UP00271A_1	MBF subunit p120, Mbp1, Transcription factor MBP1, YDL056W	krgrhgACGCGTcArrwrma	Saccharomyces cerevisiae
UP00326A_1	FUN80, GRM/PRTF protein, Mcm1, Pheromone receptor transcription factor, YM9532.08, YMR043W	wstttCCcawwtsGGAmayd	Saccharomyces cerevisiae
UP00382A_1	MDL-1	Awkwwtwaaaawwa	Caenorhabditis elegans
UP00186A_1	C530044H18Rik, Evi8, Homeobox protein Meis1, Meis1, myeloid ecotropic viral integration 1	wasbAsCTGTCAWwac	Mus musculus
UP00233A_1	AI385561, D330041M02Rik, Homeobox protein MOX-1, Meox1, mesenchyme homeobox 1, Mox1	rvkgTAATTAsmycAg	Mus musculus
UP00345A_1	Met32, Methionine-requiring protein 32, Transcriptional regulator MET32, YD9320A.03C, YDR253C	kyyyawAsTGTGGCGysbstm	Saccharomyces cerevisiae
UP00339A_1	"Protein MGA1, Mga1, YGR249W"	wrsrhtAtAGAACAythhwwm	Saccharomyces cerevisiae
UP00291A_1	CAT4, Mig1, Regulatory protein CAT4, Regulatory protein MIG1, SSN1, TDS22,	kwawdwAATGCGGGGkrmwwk	Saccharomyces cerevisiae
UP00349A_1	Mig2, MLZ1, Regulatory protein MIG2, YGL209W	wyrwryTACCCCGCAwTtwrk	Saccharomyces cerevisiae
UP00317A_1	Hypothetical 43.1 kDa protein in GAL83-YPT8 intergenic region, Mig3, YER028C	acryrytACCCCGCAwwtwrk	Saccharomyces cerevisiae
UP00460A_1 UP00460A_2	Modifier of Transcription, Mot3, ROX7	crctskarmAGGCACskysgay	Saccharomyces cerevisiae
UP00460A_3	Modifier of Transcription, Mot3, ROX7	wTTACAyr	Saccharomyces cerevisiae
UP00226A_1	A430109D20Rik, Homeobox protein Meis2, Meis1-related protein 1, Mrg1, myeloid ecotropic integration site-related gene 1, Stra10	warsAsCTGTCAAway	Mus musculus
UP00210A_1	AI573393, Homeobox protein Meis3, Meis1-related protein 2, Mrg2, myeloid ecotropic integration site-related gene 2	wadbAsCTGTCAwwmc	Mus musculus
UP00507A_1	153515_at, 99B, CG1897, Dmel\CG1897, l(3)FA30, ltt, Msh, msh-1, msh1, Msx, segmentation homeobox, Protein drop, Protein msh	tarcrsCrCyAATTAgygywyy	Drosophila melanogaster
UP00461A_1 UP00461A_2	FUP1, HRB382, Msn1, MSS10, Multicopy suppressor of SNF1 mutation, PHD2	awhvsvdATTTGTCCTtrwawy	Saccharomyces cerevisiae
UP00461A_3	FUP1, HRB382, Msn1, MSS10, Multicopy suppressor of SNF1 mutation, PHD2	rrATGTCCvrg	Saccharomyces cerevisiae
UP00234A_1	AA675338, AI324650, homeo box, Homeobox protein MSX-1, Hox-7, Hox-7.1, Hox7, Msh homeobox 1-like protein, msh-like 1, Msx1, muscle-segment homeobox	krmwayTAATTAatwm	Mus musculus
UP00156A_1	BB122635, homeo box, Homeobox protein MSX-2, Hox-8, Hox-8.1, Hox8, Hox8.1, 2, Msx2	vmagACyAATTAgykht	Mus musculus
UP00603B_1	CRS2, FPP, Homeobox protein Hox-8, homeobox protein MSX-2, HOX8, MSH, PFM, PFM1	wtwtrtgyAATTAwttaaktysw	Homo sapiens
UP00603B_2	CRS2, FPP, Homeobox protein Hox-8, homeobox protein MSX-2, HOX8, MSH, PFM, PFM1	ssgksgcAkYAATTAskmmymya	Homo sapiens
UP00603C_2	CRS2, FPP, Homeobox protein Hox-8, homeobox protein MSX-2, HOX8, MSH, PFM, PFM1	ydmmayrCyAATTrGtmwtyrs	Homo sapiens
UP00603C_1	CRS2, FPP, Homeobox protein Hox-8, homeobox protein MSX-2, HOX8, MSH, PFM, PFM1	awwsydrACYAATTAdsgcmdy	Homo sapiens
UP00603A_2	CRS2, FPP, Homeobox protein Hox-8, homeobox protein MSX-2, HOX8, MSH, PFM, PFM1	bwyraaaacYAATTAaywhwmby	Homo sapiens
UP00603A_1	CRS2, FPP, Homeobox protein Hox-8, homeobox protein MSX-2, HOX8, MSH, PFM, PFM1	mtwyaaaAAcCAATTAacwmray	Homo sapiens
UP00171A_1	homeo box, Homeobox protein MSX-3, msh-like 3, Msx3	mamAAcyAATTAAktw	Mus musculus
UP00097A_1	metal response element binding transcription factor 1, metal response element-binding factor 1, Metal-regulatory transcription factor 1, metalloregulatory transcription factor, MRE-binding transcription factor, Mtf-1, Mtf1, Transcription factor MTF-1	kggyCGTGYGCAamdh	Mus musculus
UP00097A_2	metal response element binding transcription factor 1, metal response element-binding factor 1, Metal-regulatory transcription factor 1, metalloregulatory transcription factor, MRE-binding transcription factor, Mtf-1, Mtf1, Transcription factor MTF-1	aaatawgAAawawv	Mus musculus

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.

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