Database '3D-footprint 20210203' (DNA Binding Motifs 301-350)

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AccessionsNamesConsensusOrganismsDescription and notes
6pw2_IJKLEpstein-Barr nuclear antigen 1AATAGCATnTnTTACCCnnnGGGAAGCnnnnGnTATEpstein-Barr virus (strain B95-8) (HHV-4)
Human herpesvirus 4
Structural Basis for Cooperative Binding of EBNA1 to the Epstein-Barr

3vd6_CErythroid transcription factorTTATCAGAtaMus musculusBoth Zn Fingers of GATA1 Bound to Palindromic DNA Recognition

3vek_FErythroid transcription factorTTATCAGAtgMus musculusBoth Zn Fingers of GATA1 Bound to Palindromic DNA Recognition

1gat_AERYTHROID TRANSCRIPTION FACTOR GATA-1AGATAGallus gallusSOLUTION STRUCTURE OF THE SPECIFIC DNA COMPLEX OF THE ZINC

1gau_AERYTHROID TRANSCRIPTION FACTOR GATA-1aGATaGallus gallusSOLUTION STRUCTURE OF THE SPECIFIC DNA COMPLEX OF THE ZINC

2gat_AERYTHROID TRANSCRIPTION FACTOR GATA-1tatCTGallus gallusSOLUTION STRUCTURE OF THE C-TERMINAL DOMAIN OF CHICKEN GATA-1 BOUND

3gat_AERYTHROID TRANSCRIPTION FACTOR GATA-1AGaTaGallus gallusSOLUTION NMR STRUCTURE OF THE C-TERMINAL DOMAIN OF CHICKEN GATA-1

4aa6_ABESTROGEN RECEPTORGGTCAnnnTGACcHomo sapiensThe oestrogen receptor recognizes an imperfectly palindromic response element through

4aa6_EESTROGEN RECEPTORaaGTCAHomo sapiensThe oestrogen receptor recognizes an imperfectly palindromic response element through

4aa6_EFESTROGEN RECEPTORAGTCAnnnTGACCHomo sapiensThe oestrogen receptor recognizes an imperfectly palindromic response element through

1f4s_PETHANOL REGULON TRANSCRIPTIONAL FACTORGATCCGCACEmericella nidulans
Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
STRUCTURE OF TRANSCRIPTIONAL FACTOR ALCR IN COMPLEX WITH A TARGET

1f5e_PETHANOL REGULON TRANSCRIPTIONAL FACTORgTgCGGATEmericella nidulans
Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
STRUCTURE OF TRANSCRIPTIONAL FACTOR ALCR IN COMPLEX WITH A TARGET

1gcc_AETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1TGGCGGCTAArabidopsis thalianaSOLUTION NMR STRUCTURE OF THE COMPLEX OF GCC-BOX BINDING DOMAIN

5wx9_AEthylene-responsive transcription factor ERF096CTGGcGGCTaArabidopsis thalianaCrystal Structure of AtERF96 with GCC-box
4uuv_AMETS TRANSLOCATION VARIANT 4ACnTCCGnnnnCGGAaGtHomo sapiensStructure of the DNA binding ETS domain of human ETV4

4uuv_DPETS TRANSLOCATION VARIANT 4CGGAnGtnnnCGGAaGtHomo sapiensStructure of the DNA binding ETS domain of human ETV4

4uuv_GJETS TRANSLOCATION VARIANT 4TCCGnTAnCGGAnGAHomo sapiensStructure of the DNA binding ETS domain of human ETV4

4uuv_SETS TRANSLOCATION VARIANT 4ctTCCGHomo sapiensStructure of the DNA binding ETS domain of human ETV4

4uuv_SVETS TRANSLOCATION VARIANT 4CGGAAnTnnnCGGAnGHomo sapiensStructure of the DNA binding ETS domain of human ETV4

4uno_AETS TRANSLOCATION VARIANT 5CGGaHomo sapiensCrystal structure of the ETS domain of human ETV5 in

1dux_FETS-DOMAIN PROTEIN ELK-1tCCGgHomo sapiensELK-1/DNA STRUCTURE REVEALS HOW RESIDUES DISTAL FROM DNA-BINDING SURFACE AFFECT

1hbx_GETS-DOMAIN PROTEIN ELK-4ttCCGHomo sapiensTernary Complex of SAP-1 and SRF with specific SRE DNA
1k6o_ABCETS-domain protein ELK-4AGGATnTCCATATTAGGAHomo sapiensCrystal Structure of a Ternary SAP-1/SRF/c-fos SRE DNA Complex
3jtg_AETS-related transcription factor Elf-3TTCCTgnTTMus musculusCrystal structure of mouse Elf3 C-terminal DNA-binding domain in complex

2stt_AETS1cCGGaHomo sapiensSOLUTION NMR STRUCTURE OF THE HUMAN ETS1/DNA COMPLEX, 25 STRUCTURES
2stw_AETS1CCGgHomo sapiensSOLUTION NMR STRUCTURE OF THE HUMAN ETS1/DNA COMPLEX, RESTRAINED REGULARIZED

6jbx_AFatty acid biosynthesis transcriptional regulatorTCnaATnATstrain ATCC BAA-255 / R6
Streptococcus pneumoniae
Crystal structure of Streptococcus pneumoniae FabT in complex with DNA
6jbx_ABFatty acid biosynthesis transcriptional regulatorATnnTnYgnnnnTcnnAnnATstrain ATCC BAA-255 / R6
Streptococcus pneumoniae
Crystal structure of Streptococcus pneumoniae FabT in complex with DNA
1h9t_ABFATTY ACID METABOLISM REGULATOR PROTEINTGGTnCgACCAEscherichia coli
strain K12
FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI IN

1h9t_BFATTY ACID METABOLISM REGULATOR PROTEINbGGynCEscherichia coli
strain K12
FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI IN

1hw2_ABFATTY ACID METABOLISM REGULATOR PROTEINTGGTCCGACCEscherichia coli
strain K12
FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN ECHERICHIA

1hw2_BFATTY ACID METABOLISM REGULATOR PROTEINtGGtncgEscherichia coli
strain K12
FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN ECHERICHIA

4p9u_FFatty acid metabolism regulator proteinTnaCCastrain ATCC 39315 / El Tor Inaba N16961
Vibrio cholerae serotype O1
FadR, Fatty Acid Responsive Transcription Factor from Vibrio cholerae, in

4i2o_ABFixK2 proteintGAnnnnnnTCaBradyrhizobium japonicumThe Structure of FixK2 from Bradyrhizobium japonicum
4i2o_BFixK2 proteinTCAaBradyrhizobium japonicumThe Structure of FixK2 from Bradyrhizobium japonicum
4bhk_AFLORICAULA/LEAFY HOMOLOG 1GGRmGrTPhyscomitrella patens
Physcomitrium patens (Spreading-leaved earth moss)
Crystal Structure of Moss Leafy bound to DNA
4bhk_ABFLORICAULA/LEAFY HOMOLOG 1GGnCGACCnnnGGrCGgTPhyscomitrella patens
Physcomitrium patens (Spreading-leaved earth moss)
Crystal Structure of Moss Leafy bound to DNA
6ako_CForkhead box protein C2TgtTTAHomo sapiensCrystal Structure of FOXC2 DBD Bound to DBE2 DNA
6akp_CForkhead box protein C2anaCAHomo sapiensCrystal Structural of FOXC2 DNA binding domain bound to PC

6o3t_ABForkhead box protein C2GTTTATAAACAHomo sapiensStructural basis of FOXC2 and DNA interactions
6o3t_BForkhead box protein C2TAAaCHomo sapiensStructural basis of FOXC2 and DNA interactions
7cby_CForkhead box protein G1TAAACAHomo sapiensStructure of FOXG1 DNA binding domain bound to DBE2 DNA

2c6y_AFORKHEAD BOX PROTEIN K2TanTGTTTAHomo sapiensCrystal structure of interleukin enhancer-binding factor 1 bound to DNA
2c6y_ABFORKHEAD BOX PROTEIN K2TAAACAATACAHomo sapiensCrystal structure of interleukin enhancer-binding factor 1 bound to DNA
3g73_AForkhead box protein M1TAAaCaHomo sapiensStructure of the FOXM1 DNA binding
3g73_ABForkhead box protein M1TgtTTATAAACAHomo sapiensStructure of the FOXM1 DNA binding
6el8_AForkhead box protein N1trCGCCHomo sapiensCrystal structure of the Forkhead domain of human FOXN1 in

6nce_AForkhead box protein N3TaAaCAHomo sapiensCrystal structure of the human FOXN3 DNA binding domain in

6ncm_ABForkhead box protein N3TAGCGtaHomo sapiensCrystal structure of the human FOXN3 DNA binding domain in

3co6_CForkhead box protein O1TAAAcAHomo sapiensCrystal Structure of FoxO1 DBD Bound to DBE1 DNA


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