Database '3D-footprint 20210203' (DNA Binding Motifs 1201-1250)

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AccessionsNamesConsensusOrganismsDescription and notes
6y42_BRrf2 family transcriptional regulatorCTCGGACAstrain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745
Streptomyces venezuelae
Crystal Structure of RsrR complexed to a 39 basepair DNA

5mhk_ARS1tCGtHuman herpes simplex virus 1
Human herpesvirus 1 (strain 17) (HHV-1)
ICP4 DNA-binding domain in complex with 19mer DNA duplex from

5mhk_ABRS1CknATCGyHuman herpes simplex virus 1
Human herpesvirus 1 (strain 17) (HHV-1)
ICP4 DNA-binding domain in complex with 19mer DNA duplex from

5mhk_CDJRS1CGnnnnnaCGATHuman herpes simplex virus 1
Human herpesvirus 1 (strain 17) (HHV-1)
ICP4 DNA-binding domain in complex with 19mer DNA duplex from

1hjc_DRUNT-RELATED TRANSCRIPTION FACTOR 1CaaCCACAMus musculusCRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN BOUND TO A DNA

3wts_ARunt-related transcription factor 1TGTGGctTMus musculusCrystal structure of the complex comprised of ETS1, RUNX1, CBFBETA,

3wts_ACRunt-related transcription factor 1AGGATGTGGcttMus musculus
Homo sapiens
Crystal structure of the complex comprised of ETS1, RUNX1, CBFBETA,

3wtt_ACRunt-related transcription factor 1gCCACATCCtMus musculus
Homo sapiens
Crystal structure of the complex comprised of phosphorylated ETS1, RUNX1,

3wtt_FRunt-related transcription factor 1TGTGGctTMus musculusCrystal structure of the complex comprised of phosphorylated ETS1, RUNX1,

3wtu_ACRunt-related transcription factor 1GCCACATCCTMus musculus
Homo sapiens
Crystal structure of the complex comprised of ETS1 (V170A), RUNX1,

3wtu_FRunt-related transcription factor 1AAGCCACAMus musculusCrystal structure of the complex comprised of ETS1 (V170A), RUNX1,

3wtv_ACRunt-related transcription factor 1AGGATGTGGCMus musculus
Homo sapiens
Crystal structure of the complex comprised of ETS1(V170G), RUNX1, CBFBETA,

3wtv_FRunt-related transcription factor 1agCCACAMus musculusCrystal structure of the complex comprised of ETS1(V170G), RUNX1, CBFBETA,

3wtw_ACRunt-related transcription factor 1GCCACATCCTMus musculus
Homo sapiens
Crystal structure of the complex comprised of ETS1(K167A), RUNX1, CBFBETA,

3wtw_FRunt-related transcription factor 1TGTGGctwMus musculusCrystal structure of the complex comprised of ETS1(K167A), RUNX1, CBFBETA,

3wtx_ACRunt-related transcription factor 1GCCACATCCTMus musculus
Homo sapiens
Crystal structure of the complex comprised of ETS1(Y329A), RUNX1, CBFBETA,

3wtx_FRunt-related transcription factor 1TGTGGcTtMus musculusCrystal structure of the complex comprised of ETS1(Y329A), RUNX1, CBFBETA,

3wty_ACRunt-related transcription factor 1GCCACATCCTMus musculus
Homo sapiens
Crystal structure of the complex comprised of ETS1(G333P), RUNX1, CBFBETA,

3wty_FRunt-related transcription factor 1TGTGGCMus musculusCrystal structure of the complex comprised of ETS1(G333P), RUNX1, CBFBETA,

3wu1_ARunt-related transcription factor 1AAGCCACAMus musculusCrystal structure of the ETS1-RUNX1-DNA ternary complex
3wu1_ABRunt-related transcription factor 1AGGATGTGGCTTMus musculus
Homo sapiens
Crystal structure of the ETS1-RUNX1-DNA ternary complex
4l0y_ARunt-related transcription factor 1AAGCCACAMus musculusCrystal structure of Runx1 and Ets1 bound to TCR alpha

4l0y_ABRunt-related transcription factor 1AAGCCACATCCTMus musculus
Homo sapiens
Crystal structure of Runx1 and Ets1 bound to TCR alpha

4l0z_ABRunt-related transcription factor 1AAgCCACATCCTMus musculus
Homo sapiens
Crystal structure of Runx1 and Ets1 bound to TCR alpha

4l18_ABRunt-related transcription factor 1aGGATGTGGCTTMus musculus
Homo sapiens
Crystal structure of Runx1 and Ets1 bound to TCR alpha

4l18_ERunt-related transcription factor 1AAGCCACAMus musculusCrystal structure of Runx1 and Ets1 bound to TCR alpha

4l18_EFRunt-related transcription factor 1AGGATGTGGCTTMus musculus
Homo sapiens
Crystal structure of Runx1 and Ets1 bound to TCR alpha

1yo5_CSAM pointed domain containing ets transcription factortCCtHomo sapiensAnalysis of the 2.0A crystal structure of the protein-DNA complex

2hos_ASegmentation polarity homeobox protein engrailedTaATCcDrosophila melanogasterPhage-Selected Homeodomain Bound to Unmodified DNA
2hos_ABSegmentation polarity homeobox protein engrailedTCCnnGGATTADrosophila melanogasterPhage-Selected Homeodomain Bound to Unmodified DNA
2hot_ABSegmentation polarity homeobox protein engrailedTAATCcnngGDrosophila melanogasterPhage selected homeodomain bound to modified DNA
6m3d_CSegmentation polarity homeobox protein engrailed,Segmentation polarity homeobox protein engrailedCyAATCcDrosophila melanogasterX-ray crystal structure of tandemly connected engrailed homeodomains (EHD) with

1jgg_ABSegmentation Protein Even-SkippedyAATtsAATtDrosophila melanogasterEven-skipped Homeodomain Complexed to AT-rich DNA
1jgg_BSegmentation Protein Even-SkippedyAATDrosophila melanogasterEven-skipped Homeodomain Complexed to AT-rich DNA
1hbx_ASERUM RESPONSE FACTORTTAGGAnnTHomo sapiensTernary Complex of SAP-1 and SRF with specific SRE DNA
1hbx_ABGSERUM RESPONSE FACTORCGGAAnTCCTAATTAGHomo sapiensTernary Complex of SAP-1 and SRF with specific SRE DNA
1hbx_DEHSERUM RESPONSE FACTORCTAATTAGsanTTCCGHomo sapiensTernary Complex of SAP-1 and SRF with specific SRE DNA
1k6o_BSerum response factorTATGGAHomo sapiensCrystal Structure of a Ternary SAP-1/SRF/c-fos SRE DNA Complex
2gzk_ASex-determining region on Y / HMGB1GgGATCnnAACAAcGCRattus norvegicusStructure of a complex of tandem HMG boxes and DNA
1j46_ASEX-DETERMINING REGION Y PROTEINGTTTGTGHomo sapiens3D Solution NMR Structure of the Wild Type HMG-BOX Domain

1j47_ASEX-DETERMINING REGION Y PROTEINACAAACHomo sapiens3D Solution NMR Structure of the M9I Mutant of the

6edb_ABSex-determining region Y protein,Cyclic GMP-AMP synthasecATTgkknnnnnCcHomo sapiensCrystal structure of SRY.hcGAS-21bp dsDNA complex
6edb_BSex-determining region Y protein,Cyclic GMP-AMP synthaseAATgHomo sapiensCrystal structure of SRY.hcGAS-21bp dsDNA complex
1ku7_Asigma factor sigACTTGACAThermus aquaticusCrystal Structure of Thermus aquatics RNA Polymerase SigmaA Subunit Region

1rio_Hsigma factor SigAcTTGACaThermus aquaticusStructure of bacteriophage lambda cI-NTD in complex with sigma-region4 of

1bf5_ASIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 1-ALPHA/BETAGTAanngCHomo sapiensTYROSINE PHOSPHORYLATED STAT-1/DNA COMPLEX
6qhd_ASignal transducer and activator of transcription 3GGAAHomo sapiensLysine acetylated and tyrosine phosphorylated STAT3 in a complex with

6qhd_ABSignal transducer and activator of transcription 3TTACsGGAAHomo sapiensLysine acetylated and tyrosine phosphorylated STAT3 in a complex with

4y5w_ACSignal transducer and activator of transcription 6CCnnGGAAnnnnnAHomo sapiensTranscription factor-DNA complex
4y5w_BSignal transducer and activator of transcription 6GgAannnnnAHomo sapiensTranscription factor-DNA complex


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