Database '3D-footprint 20210203' (DNA Binding Motifs 51-100)

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AccessionsNamesConsensusOrganismsDescription and notes
1a02_FJNAP-1 FRAGMENT FOSGGAananwTGnyTCAHomo sapiensSTRUCTURE OF THE DNA BINDING DOMAINS OF NFAT, FOS AND

4egy_ABArabinose metabolism transcriptional repressorTGyACGAaCABacillus subtilis
strain 168
Crystal Structure of AraR(DBD) in complex with operator ORA1
4egy_BArabinose metabolism transcriptional repressorTCgnaCABacillus subtilis
strain 168
Crystal Structure of AraR(DBD) in complex with operator ORA1
4egz_ABArabinose metabolism transcriptional repressoraTGTnnATnnACABacillus subtilis
strain 168
Crystal Structure of AraR(DBD) in complex with operator ORR3
4egz_BArabinose metabolism transcriptional repressorTnnACATBacillus subtilis
strain 168
Crystal Structure of AraR(DBD) in complex with operator ORR3
4h0e_AArabinose metabolism transcriptional repressorTGwnyGBacillus subtilis
strain 168
Crystal Structure of mutant ORR3 in complex with NTD of

4h0e_ABArabinose metabolism transcriptional repressorTGtaCGGaCABacillus subtilis
strain 168
Crystal Structure of mutant ORR3 in complex with NTD of

5d4r_AArabinose metabolism transcriptional repressorctnnCABacillus subtilis
strain 168
Crystal Structure of AraR(DBD) in complex with operator ORE1
5d4r_ABArabinose metabolism transcriptional repressorTGtnCGTaCCaBacillus subtilis
strain 168
Crystal Structure of AraR(DBD) in complex with operator ORE1
5d4s_AArabinose metabolism transcriptional repressorCGTATGTBacillus subtilis
strain 168
Crystal Structure of AraR(DBD) in complex with operator ORX1
5d4s_ABArabinose metabolism transcriptional repressorCrtACGnaCABacillus subtilis
strain 168
Crystal Structure of AraR(DBD) in complex with operator ORX1
2p5l_DArginine repressoraAtTCABacillus subtilis
strain 168
Crystal structure of a dimer of N-terminal domains of AhrC

2p5l_DHArginine repressorAAtTCAnntTGAATTBacillus subtilis
strain 168
Crystal structure of a dimer of N-terminal domains of AhrC

3ere_DArginine repressorTATgCaMycobacterium tuberculosis
strain ATCC 25618 / H37Rv
Crystal structure of the arginine repressor protein from Mycobacterium tuberculosis

3fhz_ADArginine repressorTGCATAnngATTMAMycobacterium tuberculosis
strain ATCC 25618 / H37Rv
Crystal structure of the arginine repressor from Mycobacterium tuberculosis bound

3fhz_BFArginine repressorTGAATcnnTAyTCAMycobacterium tuberculosis
strain ATCC 25618 / H37Rv
Crystal structure of the arginine repressor from Mycobacterium tuberculosis bound

3fhz_CEArginine repressorTGAaTAnngATGCAMycobacterium tuberculosis
strain ATCC 25618 / H37Rv
Crystal structure of the arginine repressor from Mycobacterium tuberculosis bound

3fhz_EArginine repressorgATgCAMycobacterium tuberculosis
strain ATCC 25618 / H37Rv
Crystal structure of the arginine repressor from Mycobacterium tuberculosis bound

3laj_ADArginine repressorGCATCnnTATGCAMycobacterium tuberculosis
strain ATCC 25618 / H37Rv
The Structure of the Intermediate Complex of the Arginine Repressor

3laj_BF
3laj_CE
Arginine repressorTGCATAnnGATGCMycobacterium tuberculosis
strain ATCC 25618 / H37Rv
The Structure of the Intermediate Complex of the Arginine Repressor

3laj_EArginine repressorGCaTcMycobacterium tuberculosis
strain ATCC 25618 / H37Rv
The Structure of the Intermediate Complex of the Arginine Repressor

3lap_ADArginine repressorGCATCnnTATGCAMycobacterium tuberculosis
strain ATCC 25618 / H37Rv
The Structure of the Intermediate Complex of the Arginine Repressor

3lap_BArginine repressorTGCATAMycobacterium tuberculosis
strain ATCC 25618 / H37Rv
The Structure of the Intermediate Complex of the Arginine Repressor

3lap_BFArginine repressorTGCATAnnGATGCMycobacterium tuberculosis
strain ATCC 25618 / H37Rv
The Structure of the Intermediate Complex of the Arginine Repressor

3lap_CEArginine repressorTGCATAnnGATGCMycobacterium tuberculosis
strain ATCC 25618 / H37Rv
The Structure of the Intermediate Complex of the Arginine Repressor

5jgh_ADGJARS-binding factor 2, mitochondrialTnATATAnnnnnATAAAnnnnATnATATAnnnnnnTAAAnnnnATnATATnnnnnnnTAAAnnnnnTnATAnnnnnnnnTAAASaccharomyces cerevisiae
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Crystal structure of the mitochondrial DNA packaging protein Abf2p in

5jgh_JARS-binding factor 2, mitochondrialTnATATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAAASaccharomyces cerevisiae
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Crystal structure of the mitochondrial DNA packaging protein Abf2p in

5jh0_ADARS-binding factor 2, mitochondrialAATAnnnnnnnATATAATAnnnAATAnnnnnnnnTATaATSaccharomyces cerevisiae
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Crystal structure of the mitochondrial DNA packaging protein Abf2p in

5jh0_DARS-binding factor 2, mitochondrialATATaATAnnnAATASaccharomyces cerevisiae
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Crystal structure of the mitochondrial DNA packaging protein Abf2p in

5nj8_ABAryl hydrocarbon receptorTtgCGTGAHomo sapiensStructural basis for aryl hydrocarbon receptor mediated gene activation
4zpk_AAryl hydrocarbon receptor nuclear translocatorCGCACGMus musculusCrystal Structure of the Heterodimeric HIF-2a:ARNT Complex with HRE DNA
4zpk_ABAryl hydrocarbon receptor nuclear translocatorACGTGCGMus musculusCrystal Structure of the Heterodimeric HIF-2a:ARNT Complex with HRE DNA
4zpr_ABAryl hydrocarbon receptor nuclear translocatorgCACGtMus musculusCrystal Structure of the Heterodimeric HIF-1a:ARNT Complex with HRE DNA
5nj8_DAryl hydrocarbon receptor nuclear translocatorCgTGAHomo sapiensStructural basis for aryl hydrocarbon receptor mediated gene activation
5sy7_ABAryl hydrocarbon receptor nuclear translocatoraCGTGCgMus musculusCrystal Structure of the Heterodimeric NPAS3-ARNT Complex with HRE DNA
5v0l_AAryl hydrocarbon receptor nuclear translocatorwsAnCHomo sapiensCrystal structure of the AHR-ARNT heterodimer in complex with the

5v0l_ABAryl hydrocarbon receptor nuclear translocatorwcAGCHomo sapiens
Mus musculus
Crystal structure of the AHR-ARNT heterodimer in complex with the

4h10_AAryl hydrocarbon receptor nuclear translocator-like protein 1TCAcgHomo sapiensIntermolecular recognition revealed by the complex structure of human CLOCK-BMAL1

4h10_ABAryl hydrocarbon receptor nuclear translocator-like protein 1TCACGtGHomo sapiensIntermolecular recognition revealed by the complex structure of human CLOCK-BMAL1

6sdg_ABAuxin response factortTGTcGGCnnnnnGCcnACAMarchantia aquatica
Marchantia polymorpha (Liverwort)
Crystal structure of the DNA binding domain of M. polymorpha

6sdg_BAuxin response factortTGTcGGCMarchantia aquatica
Marchantia polymorpha (Liverwort)
Crystal structure of the DNA binding domain of M. polymorpha

4ldx_AAuxin response factor 1GGGAnACAAArabidopsis thalianaCrystal structure of the DNA binding domain of arabidopsis thaliana

4ldx_ABAuxin response factor 1TTGTntCCCnnnGGGAnACAArabidopsis thalianaCrystal structure of the DNA binding domain of arabidopsis thaliana

6ycq_AAuxin response factor 1TTGtCGgCArabidopsis thalianaCrystal structure of the DNA binding domain of Arabidopsis thaliana

6ycq_ABAuxin response factor 1TGTCGGtnnnnnGCCGACAAArabidopsis thalianaCrystal structure of the DNA binding domain of Arabidopsis thaliana

3do7_ABAvian reticuloendotheliosis viral (V-rel) oncogene related BGGGAnTTCCMus musculus
Homo sapiens
X-ray structure of a NF-kB p52/RelB/DNA complex
6ki6_BB-cell lymphoma/leukemia 11ATGGTCAagHomo sapiensCrystal structure of BCL11A in complex with gamma-globin -115 HPFH

6u9q_AB-cell lymphoma/leukemia 11ATGGTCAAgHomo sapiensCrystal Structure Analysis of DNA-BCL11A Znf domain complex
6j9b_AB3 domain-containing transcription factor FUS3cATGCaArabidopsis thalianaArabidopsis FUS3-DNA complex
6j9c_DB3 domain-containing transcription factor LEC2tGCATGArabidopsis thalianaCrystal structure of Arabidopsis thaliana transcription factor LEC2-DNA complex


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