Database '3D-footprint 20210203' (DNA Binding Motifs 701-750)

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AccessionsNamesConsensusOrganismsDescription and notes
6fzs_ABMothers against decapentaplegic homolog 5aGkCGCGCCtHomo sapiensCrystal structure of Smad5-MH1 bound to the GGCGC site.
6fzs_BMothers against decapentaplegic homolog 5CGCCtHomo sapiensCrystal structure of Smad5-MH1 bound to the GGCGC site.
6tbz_AMothers against decapentaplegic homolog 5CgcCGallus gallusCrystal structure of the MH1 domain of Smad5-Smad3 chimera construct

6tce_AMothers against decapentaplegic homolog 5tAGcHomo sapiensCrystal structure of the GGCT site-bound MH1 domain of Smad5

6fzt_AMothers against decapentaplegic homolog 9CgcCHomo sapiensCrystal structure of Smad8_9-MH1 bound to the GGCGC site.
6fzt_ABMothers against decapentaplegic homolog 9GGCGCGCCHomo sapiensCrystal structure of Smad8_9-MH1 bound to the GGCGC site.
3d6y_AMultidrug-efflux transporter 1 regulatorCCCTBacillus subtilis
strain 168
Crystal structure of R275E mutant of BMRR bound to DNA

3d6z_AMultidrug-efflux transporter 1 regulatorCCCTBacillus subtilis
strain 168
Crystal structure of R275E mutant of BMRR bound to DNA

3d71_AMultidrug-efflux transporter 1 regulatorCCCTBacillus subtilis
strain 168
Crystal structure of E253Q BMRR bound to 22 base pair

3q3d_AMultidrug-efflux transporter 1 regulatorCCCTBacillus subtilis
strain 168
Crystal structure of BmrR bound to puromycin
1exi_AMULTIDRUG-EFFLUX TRANSPORTER REGULATORCCCTBacillus subtilis
strain 168
CRYSTAL STRUCTURE OF TRANSCRIPTION ACTIVATOR BMRR, FROM B. SUBTILIS, BOUND

1exj_AMULTIDRUG-EFFLUX TRANSPORTER REGULATORcCcTBacillus subtilis
strain 168
CRYSTAL STRUCTURE OF TRANSCRIPTION ACTIVATOR BMRR, FROM B. SUBTILIS, BOUND

1xs9_AMultiple antibiotic resistance protein marAtGCCannnnnTGnnAAEscherichia coli
strain K12
A MODEL OF THE TERNARY COMPLEX FORMED BETWEEN MARA, THE

5h3r_AMultiple antibiotic resistance protein MarRAnnTTGCCEscherichia coli
strain K12
Crystal Structure of mutant MarR C80S from E.coli complexed with

5h3r_ABMultiple antibiotic resistance protein MarRTnnTTGCCnGGGCAAnnTEscherichia coli
strain K12
Crystal Structure of mutant MarR C80S from E.coli complexed with

1nkp_AMyc proto-oncogene proteincGTGcHomo sapiensCrystal structure of Myc-Max recognizing DNA
1nkp_ABMyc proto-oncogene proteingCACGTGCTHomo sapiensCrystal structure of Myc-Max recognizing DNA
1nkp_DEMyc proto-oncogene proteinCACGTGcHomo sapiensCrystal structure of Myc-Max recognizing DNA
5i50_ABMyc proto-oncogene proteinCCACGTGAAHomo sapiensStructure of OmoMYC bound to double-stranded DNA
5i50_BMyc proto-oncogene proteinCgTGGHomo sapiensStructure of OmoMYC bound to double-stranded DNA
2mf8_AMyelin transcription factor 1aAAgTTcMus musculusHADDOCK model of MyT1 F4F5 - DNA complex
3kov_ABMyocyte-specific enhancer factor 2ATTAnnnnnAGHomo sapiensStructure of MEF2A bound to DNA reveals a completely folded

3kov_IJMyocyte-specific enhancer factor 2ATTnnnnnTAGHomo sapiensStructure of MEF2A bound to DNA reveals a completely folded

3mu6_ABMyocyte-specific enhancer factor 2ACTAnnnnTAGHomo sapiensInhibiting the Binding of Class IIa Histone Deacetylases to Myocyte

3p57_ABMyocyte-specific enhancer factor 2ATAnnnnTAGHomo sapiensCrystal structure of the p300 TAZ2 domain bound to MEF2

3p57_CDMyocyte-specific enhancer factor 2ACTannnntAAHomo sapiensCrystal structure of the p300 TAZ2 domain bound to MEF2

3p57_IJMyocyte-specific enhancer factor 2ACTAnnnnTAAHomo sapiensCrystal structure of the p300 TAZ2 domain bound to MEF2

1c7u_ABMYOCYTE-SPECIFIC ENHANCER FACTOR 2A, C4 FORMCGncTAnnnnTAgnCGHomo sapiensComplex of the DNA binding core domain of the transcription

1c7u_BMYOCYTE-SPECIFIC ENHANCER FACTOR 2A, C4 FORMTAgncGHomo sapiensComplex of the DNA binding core domain of the transcription

1n6j_ABMyocyte-specific enhancer factor 2BTawwwrtAgHomo sapiensStructural basis of sequence-specific recruitment of histone deacetylases by Myocyte

1tqe_PQMyocyte-specific enhancer factor 2BCTnnnnntAaHomo sapiensMechanism of recruitment of class II histone deacetylases by myocyte

1tqe_RSMyocyte-specific enhancer factor 2BCTnnnnntAaHomo sapiensMechanism of recruitment of class II histone deacetylases by myocyte

6wc5_ABIMyocyte-specific enhancer factor 2BCnCTttCTnnnnnnAGHomo sapiensCrystal Structure of a Ternary MEF2B/NKX2-5/myocardin enhancer DNA Complex
6wc5_CDNMyocyte-specific enhancer factor 2BCTTTCynnnnnTAGHomo sapiensCrystal Structure of a Ternary MEF2B/NKX2-5/myocardin enhancer DNA Complex
3swm_ABDNAC domain-containing protein 19TGCnTGnnnnnnaCGCAAArabidopsis thalianaThe NAC domain of ANAC019 in complex with DNA, gold

3swm_BNAC domain-containing protein 19CAnGCAArabidopsis thalianaThe NAC domain of ANAC019 in complex with DNA, gold

3swp_ANAC domain-containing protein 19CGAAGArabidopsis thalianaANAC019 NAC domain in complex with DNA
3swp_ABCDNAC domain-containing protein 19CgnTTCnAnnnCGAAGArabidopsis thalianaANAC019 NAC domain in complex with DNA
2hzv_ANickel-responsive regulatorTCAtaEscherichia coli
strain K12
NikR-operator DNA complex
2hzv_ABCDNickel-responsive regulatorGTyTGAnnnnnnnnnnnnnnnnTCAwACEscherichia coli
strain K12
NikR-operator DNA complex
2hzv_EFGHNickel-responsive regulatoraGTATGAcnnnnnnnnnnnnnnnTCATACEscherichia coli
strain K12
NikR-operator DNA complex
6mrj_ABCDNickel-responsive regulatorTTAnTACtnnnnnnnnnnnAGTGtTAyHelicobacter pylori
Helicobacter pylori (strain ATCC 700392 / 26695)
Crystal structure of H.pylori NikR in complex with DNA
6mrj_DNickel-responsive regulatorTTAnTATHelicobacter pylori
Helicobacter pylori (strain ATCC 700392 / 26695)
Crystal structure of H.pylori NikR in complex with DNA
1je8_ABNitrate/Nitrite Response Regulator Protein NARLTACCnAnnnaTGGGTAEscherichia coli
strain K12
Two-Component response regulator NarL/DNA Complex: DNA Bending Found in a

1je8_EFNitrate/Nitrite Response Regulator Protein NARLTaCCnAnnnnTnGGtAEscherichia coli
strain K12
Two-Component response regulator NarL/DNA Complex: DNA Bending Found in a

1je8_FNitrate/Nitrite Response Regulator Protein NARLTnGGtAEscherichia coli
strain K12
Two-Component response regulator NarL/DNA Complex: DNA Bending Found in a

1zg1_ABNitrate/nitrite response regulator protein narLTACTnnTnnaTnGGTAEscherichia coli
strain K12
NarL complexed to nirB promoter non-palindromic tail-to-tail DNA site
1zg1_ENitrate/nitrite response regulator protein narLTACTEscherichia coli
strain K12
NarL complexed to nirB promoter non-palindromic tail-to-tail DNA site
1zg1_EFNitrate/nitrite response regulator protein narLTACCcATnnangAGTAEscherichia coli
strain K12
NarL complexed to nirB promoter non-palindromic tail-to-tail DNA site
1zg5_ABNitrate/nitrite response regulator protein narLTAmCCCtnnaGnGGtAEscherichia coli
strain K12
NarL complexed to narG-89 promoter palindromic tail-to-tail DNA site


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