Database 'JASPAR 2018' (DNA Binding Motifs 301-350)

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AccessionsNamesConsensusOrganismsDescription and notes
MA1347.1bZIP68tGCCACGTsasmwwhArabidopsis thalianaDAP-seq
MA0096.1bZIP910mTGACGTAntirrhinum majusSELEX
MA0097.1bZIP911GrTGACGTGkmCAntirrhinum majusSELEX
MA0550.1BZR1mmkmCACGTGdvmmArabidopsis thalianaChIP-chip
MA0550.2BZR1cCrCACGTGyrhmyywywhtArabidopsis thalianaDAP-seq
MA0549.1BZR2crCACGTGksvArabidopsis thalianaChIP-chip
MA0170.1C15TTAAwkrDrosophila melanogasterbacterial 1-hybrid
PF0002.1CACGTGCACGTGphylogenetic
MA0216.1cadTTTATTrDrosophila melanogasterbacterial 1-hybrid
MA0216.2cadrgymATAAAAmDrosophila melanogasterChIP-chip
MA0279.1CAD1ATTArTAAkCSaccharomyces cerevisiaeCOMPILED
PF0015.1CAGCTGCAGCTGphylogenetic
PF0076.1CAGGTACAGGTAphylogenetic
PF0012.1CAGGTGCAGGTGphylogenetic
PF0143.1CAGNWMCNNNGACCAGCACCamGGACphylogenetic
PF0160.1CAGNYGKNAAACAGcTGksAAAphylogenetic
MA1197.1CAMTA1aAarCGCGTkdrArabidopsis thalianaDAP-seq
MA0280.1CAT8CCGGarSaccharomyces cerevisiaePBM, CSA and/or DIP-chip
PF0134.1CATRRAGCCATrrAGCphylogenetic
PF0049.1CATTGTYYCATTGTyyphylogenetic
MA0217.1cauptAACADrosophila melanogasterbacterial 1-hybrid
MA0281.1CBF1gCACGTGASaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA1224.1CBF1kyyrCCGACatmArabidopsis thalianaDAP-seq
MA1217.1CBF2hytyyrCCGACATmrArabidopsis thalianaDAP-seq
MA1218.1CBF4ykAtGTCGGyrrmArabidopsis thalianaDAP-seq
MA0972.1CCA1AAATATCTArabidopsis thalianaPBM
POL004.1CCAAT-boxhyyrrCCAATsr
PF0104.1CCAATNNSNNNGCGCCAATsrsvgsGCGphylogenetic
PF0045.1CCANNAGRKGGCCCAscAGrkGGCphylogenetic
PF0165.1CCAWNWWNNNGGCCCAwbwWggmGGCphylogenetic
PF0121.1CCAWWNAAGGCCAwAwAAGGphylogenetic
PF0124.1CCAWYNNGAARCCAWTbrGAArphylogenetic
PF0130.1CCCNNGGGARCCCcgGGGArphylogenetic
PF0158.1CCCNNNNNNAAGWTCCCwsmycmAAGwTphylogenetic
PF0106.1CCGNMNNTNACGCCGGAaGTGACGphylogenetic
PF0167.1CCTNTMAGACCTtTMAGAphylogenetic
MA0579.1CDC5rsCTCAGCGsgArabidopsis thalianaSELEX
MA0973.1CDF2maWAAAGyrhArabidopsis thalianaPBM
MA0974.1CDF3awAAAGygmArabidopsis thalianaPBM
MA0878.1CDX1gymATAAAaHomo sapiensHT-SELEX
PH0012.1Cdx1wrmGGYmATWAAatkwMus musculusuniversal protein binding microarray (PBM)
MA0465.1CDX2rdGymATAAAaHomo sapiensChIP-seq
PH0013.1Cdx2drvgGymATAAAaykyMus musculusuniversal protein binding microarray (PBM)
MA0102.1CebpaTtkygCAAyvybCOMPILED
MA0102.2CEBPATtkygCAAyCOMPILED
MA0102.3CEBPAaTTGCAyAAymHomo sapiensChIP-seq
MA0466.1CEBPBkATTGCAymAyHomo sapiensChIP-seq
MA0466.2CEBPBrTTrCGCAAyHomo sapiensHT-SELEX
MA0836.1CEBPDrTTrCGCAAyHomo sapiensHT-SELEX
MA0837.1CEBPErTTrCGCAAyHomo sapiensHT-SELEX


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