Database 'JASPAR 2024' (DNA Binding Motifs 2251-2300)

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AccessionsNamesConsensusOrganismsDescription and notes
PL0017.1hlh-2::hlh-10cygkAACAGGTGktskrCaenorhabditis elegansPBM
PL0015.1hlh-2::hlh-14ykaaCAbCTGTCvmdaCaenorhabditis elegansPBM
PL0013.1hlh-2::hlh-15rrmsCAsCTGbGccmtCaenorhabditis elegansPBM
PL0010.1hlh-2::hlh-19kttrmCAksTGkymmmCaenorhabditis elegansPBM
PL0002.1hlh-2::hlh-3mrtrmCACCTGCtaayyCaenorhabditis elegansPBM
PL0011.1hlh-2::hlh-4arwwyCACCTGYThatyCaenorhabditis elegansPBM
PL0012.1hlh-2::hlh-8aymaACATmTGGtwkmCaenorhabditis elegansPBM
PL0006.1hlh-2::lin-32hmgamCAgcTGkyctcCaenorhabditis elegansPBM
PL0018.1hlh-25rrgrCGCGTGTCCywkCaenorhabditis elegansPBM
UN0704.1hlh-25CGCRTGtsCaenorhabditis elegansPBM
PL0009.1hlh-26tawgrCACGTGTCywawCaenorhabditis elegansPBM
UN0705.1hlh-26rACACGTGyCaenorhabditis elegansPBM
PL0004.1hlh-27rkrCgCGTGTCCcwdCaenorhabditis elegansPBM
UN0706.1hlh-27CGCrTGKCCaenorhabditis elegansPBM
PL0008.1hlh-29cwrhyACGCrTGkyhwaCaenorhabditis elegansPBM
UN0707.1hlh-29ACGCrTGkCaenorhabditis elegansPBM
MA1449.1hlh-30wrTCACGTGAywCaenorhabditis elegansChIP-seq
MA1449.2hlh-30TCACGTGACaenorhabditis elegansChIP-seq
PL0005.1hlh-30wgwaTCACGTGAywawyCaenorhabditis elegansPBM
UN0732.1hlh-4CAGCTGCaenorhabditis elegansChIP-seq
UN0733.1hlh-8cCAGmTGgCaenorhabditis elegansChIP-seq
MA2241.1HLH4CgcAyCAGCTGrTgcDrosophila melanogasterSELEX
UN0772.1HLH54FmmCACCTGyyvDrosophila melanogasterbacterial 1-hybrid
MA0109.1
UN0669.1		HLTFwwmCwTwkvtOryctolagus cuniculusSELEX, CASTing
PH0038.1HlxcmaTAATTrATTAymMus musculusuniversal protein binding microarray (PBM)
MA0895.1HMBOX1myTAGTTAmsHomo sapiensHT-SELEX
MA0895.2HMBOX1TAGTTAmHomo sapiensHT-SELEX
MA1881.1Hmbox1ddwwwawTTAATTaawttttSELEX
MA1881.2Hmbox1TTAATTSELEX
PH0040.1Hmbox1rwrawCTRGTTAaydwsMus musculusuniversal protein binding microarray (PBM)
MF0011.1HMG classwTTGTtMETAMODEL
MA0044.1HMG-1sTYGTayTyPisum sativumSELEX
MA0045.1HMG-I/YswasAAAtrsmramAyPisum sativumSELEX
MA2124.1Hmga1ATTTTTAwMus musculus
UN0675.1Hmga1wwkATTTTTAwwMus musculus
UN0863.1HMGB10TwATAAArabidopsis thalianaDAP-seq
UN0400.1HMGB15TWTAwTATAWaGTTTwArabidopsis thalianaDAP-seq
UN0401.1HMGB9wwwAWTTAATtArabidopsis thalianaDAP-seq
UN0401.2HMGB9AWTTAATArabidopsis thalianaDAP-seq
UN0310.1HMGXB4rsbAGGGGGCGsbHomo sapiens
MA0327.1HMRA1rCACAATSaccharomyces cerevisiaeChIP-chip
MA0318.1HMRA2crTGTAAwSaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0192.1HmxTTAATTGDrosophila melanogasterbacterial 1-hybrid
MA0896.1
PH0041.1		Hmx1msvAGCAATTAAwgvwtMus musculusuniversal protein binding microarray (PBM)
MA0896.2Hmx1AGCAATTAAMus musculusPBM
MA0897.1
PH0042.1		Hmx2acaAgCAATTAAwgvrTMus musculusuniversal protein binding microarray (PBM)
MA0897.2Hmx2aAgCAATTAAwgvrTMus musculusPBM
MA0898.1
PH0043.1		Hmx3asaAgCAATTAAwrratMus musculusuniversal protein binding microarray (PBM)
MA0898.2Hmx3AgCAATTAAMus musculusPBM
MA1882.1Hnf1wwwwwaatTAATTrvwwwwwCiona intestinalisSELEX
		

				

		


			

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.