Database 'JASPAR 2018' (DNA Binding Motifs 2151-2200)

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AccessionsNamesConsensusOrganismsDescription and notes
MA1220.1TINYytyCRCCGACAmwdhArabidopsis thalianaDAP-seq
MA0459.1tllaAAAGTCAAmDrosophila melanogasterbacterial 1-hybrid
PH0172.1Tlx2kwatyAATTAATaaywwMus musculusuniversal protein binding microarray (PBM)
PF0008.1TMTCGCGANRTCTCGCGAGAphylogenetic
PF0075.1TNCATNTCCYRTaCATTTCCCrphylogenetic
MA0350.1TOD6akbcwyasCTCATCGcsyywkSaccharomyces cerevisiaePBM
MA0408.1TOS8mTGTCAaaSaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0106.1TP53msGRACATGyCCGGGCATGTHomo sapiensSELEX
MA0106.2TP53rCATGycCarRCATGHomo sapiensChIP-seq
MA0106.3TP53rACATGyCcgGrCATGTyHomo sapiensHT-SELEX
MA0525.1TP63agrCawGyyCarrCwTGyyyHomo sapiensChIP-seq
MA0525.2TP63rACATGTygkrACATGTcHomo sapiensHT-SELEX
MA0861.1TP73drCATGTcyrrACAyGymHomo sapiensHT-SELEX
MA1073.1TRB2wrmCCTArArabidopsis thalianaPBM
MA0205.1TrlyykCTCTCtyDrosophila melanogasterDNaseI footprinting
MF0009.1TRP(MYB) classwdwCrGTTMETAMODEL
MA1352.1TRP1AAACCCTAAACCCTAAACCCTAAArabidopsis thalianaDAP-seq
MA1356.1TRP2AAACCCTAAACCCTAAACCCArabidopsis thalianaDAP-seq
MA1411.1TSAR1mGCACGTGCrPBM
MA1412.1TSAR2yGCRCGYGCrPBM
MA1161.1TSO1wwwTwaAAATTYAAAArabidopsis thalianaDAP-seq
PF0064.1TTANTCATTAwTCAphylogenetic
PF0161.1TTANWNANTGGMTTAawwAaTGGmphylogenetic
PF0026.1TTAYRTAATTAyrTAAphylogenetic
PF0141.1TTCNRGNNNNTTCTTCyrGmwsyTTCphylogenetic
PF0040.1TTCYNRGAATTCytrGAAphylogenetic
PF0072.1TTCYRGAATTCyrGAAphylogenetic
PF0172.1TTGCWCAAYTTGCwCAAyphylogenetic
PF0060.1TTGTTTTTGTTTphylogenetic
MA0460.1ttkmAGGATAAtDrosophila melanogasterbacterial 1-hybrid
PF0169.1TTTNNANAGCYRTTTTmAgAGCYRphylogenetic
MA0248.1tupwTAATkGDrosophila melanogasterbacterial 1-hybrid
MA0249.1twiycgCAyrTGTtgDrosophila melanogasterDNaseI footprinting
MA1123.1TWIST1awwCCAGATGTbyHomo sapiensChIP-seq
MA0633.1Twist2rmCATATGTkMus musculusPBM
MA0409.1TYE7CACGTGASaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0094.1UbxTAATDrosophila melanogasterSELEX
MA0094.2UbxyTTAATKRDrosophila melanogasterbacterial 1-hybrid
MA0410.1UGA3ssGCGGSASaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA1413.1UIF1aaAGATTCyrArabidopsis thalianaPBM
MA0412.1UME6TsGGCGGCTAwwTSaccharomyces cerevisiaeCOMPILED
MA0250.1unc-4tTAATTrDrosophila melanogasterbacterial 1-hybrid
MA0918.1unc-62gAsmTGTCAyttCaenorhabditis briggsaePBM
MA0926.1unc-86dTATGCATCaenorhabditis elegansPBM
MA0721.1UNCXyyAATTArHomo sapiensHT-SELEX
PH0173.1UncxvataaTTAATTAAygsgMus musculusuniversal protein binding microarray (PBM)
MA1074.1UNE10cCACGTGmArabidopsis thalianaPBM
MA0251.1unpgyTAATTrDrosophila melanogasterbacterial 1-hybrid
MA0411.1UPC2yrwACGASaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0422.1URC2yCGGAgwTAwSaccharomyces cerevisiaePBM, CSA and/or DIP-chip


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