Database 'JASPAR 2018' (DNA Binding Motifs 701-750)

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AccessionsNamesConsensusOrganismsDescription and notes
PB0124.1Gabpa_2cydtywTccsmcysmhMus musculusuniversal protein binding microarray (PBM)
MA0299.1GAL4CGGrsvAsagtrytCSaccharomyces cerevisiaePBM
MA0034.1Gam1gryAACcGmCHordeum vulgareSELEX
MA0300.1GAT1cyGATAAGSaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0301.1GAT3aGATCyammSaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0302.1GAT4ahAGATCyamaSaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0035.1Gata1sGATgsMus musculusSELEX
MA0035.2Gata1rsWGATAAgrrMus musculusChIP-seq
MA0035.3Gata1tyCTTATCTsyMus musculusChIP-seq
MA0140.2GATA1::TAL1cTTATCwskgagrarCAGHomo sapiensChIP-seq
MA1013.1GATA10TAGATCTGArabidopsis thalianaPBM
MA1014.1GATA11tAGATCTGArabidopsis thalianaPBM
MA1015.1GATA12yaGATCtrArabidopsis thalianaPBM
MA1325.1GATA14tttAGATCTrwttttArabidopsis thalianaDAP-seq
MA1016.1GATA15yryGATcrrArabidopsis thalianaPBM
MA1323.1GATA19yvGATCbGATyArabidopsis thalianaDAP-seq
MA0036.1GATA2gGATrHomo sapiensSELEX
MA0036.2GATA2wrrttCTTATCWshHomo sapiensChIP-seq
MA0036.3GATA2tyCTTATCTbyHomo sapiensChIP-seq
MA1324.1GATA20ATCsGATCArabidopsis thalianaDAP-seq
MA0037.1GATA3wGATwgHomo sapiensSELEX
MA0037.2GATA3AGATAARaHomo sapiensChIP-seq
MA0037.3GATA3wGATAAsrSMiLE-seq
PB0021.1Gata3_1bkwdwakAGATAAGArwtdargMus musculusuniversal protein binding microarray (PBM)
PB0125.1Gata3_2ytwtrywGATtktATCrrbwhmMus musculusuniversal protein binding microarray (PBM)
MA0482.1Gata4yCTTATCTsyyMus musculusChIP-seq
MA0766.1GATA5wGATAAsrHomo sapiensHT-SELEX
PB0022.1Gata5_1wwwrcTGATAAGrrgatMus musculusuniversal protein binding microarray (PBM)
PB0126.1Gata5_2rmcmrAGATATCwgybkMus musculusuniversal protein binding microarray (PBM)
MA1104.1GATA6wwvAGATAAGawaHomo sapiensChIP-seq
MA1396.1GATA6yAGATCTAgAtyyArabidopsis thalianaDAP-seq
PB0023.1Gata6_1wawmkwGATAAGarttrMus musculusuniversal protein binding microarray (PBM)
PB0127.1Gata6_2gsgrCGATATCGsmgydMus musculusuniversal protein binding microarray (PBM)
MA1017.1GATA8saGATcyrrArabidopsis thalianaPBM
MA1018.1GATA9tcyAGATCTrwArabidopsis thalianaPBM
PF0131.1GATAAGRGATAAGrphylogenetic
PF0148.1GATGKMRGCGGATGGCGGCGphylogenetic
PF0005.1GATTGGYGATTGGYphylogenetic
MA1351.1GBF3TGCCACGTsasmwwhArabidopsis thalianaDAP-seq
MA1334.1GBF6tGCCACGTCAkCwwhArabidopsis thalianaDAP-seq
MA0889.1GBX1rsyAATTAgcHomo sapiensHT-SELEX
PH0033.1Gbx1wdsmaCYAATTRGtgbwMus musculusuniversal protein binding microarray (PBM)
MA0890.1GBX2rsyAATTArsHomo sapiensHT-SELEX
PH0034.1Gbx2dscrCTAATTAGysrktMus musculusuniversal protein binding microarray (PBM)
POL003.1GC-boxwrgGGGcGGrGyyk
PF0035.1GCANCTGNYGCAsCTGyyphylogenetic
PF0010.1GCCATNTTGGCCATyTTGphylogenetic
PF0095.1GCCNNNWTAARGCCcctWTAArphylogenetic
PF0048.1GCGNNANTTCCGCGbsAcTTCCphylogenetic
PF0164.1GCGSCMNTTTGCGsCMwTTTphylogenetic


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