Database 'JASPAR 2018' (DNA Binding Motifs 1-50)

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If you want to search for a protein sequence or a DNA motif use the Sequence Search Form.


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AccessionsNamesConsensusOrganismsDescription and notes
PF0144.1AAANWWTGCAAAswwTGCphylogenetic
PF0077.1AAAYRNCTGAAAyrgCTGphylogenetic
PF0139.1AAAYWAACMAAAyAAACMphylogenetic
PF0017.1AACTTTAACTTTphylogenetic
PF0108.1AACWWCAANKAACTACAAmKphylogenetic
PF0113.1AACYNNNNTTCCSAACTaCatTTCCCphylogenetic
PF0063.1AAGWWRNYGGCAAGATGGYGGCphylogenetic
MA0206.1abd-ATTAATkADrosophila melanogasterbacterial 1-hybrid
MA0165.1Abd-BTTTATkaDrosophila melanogasterbacterial 1-hybrid
MA0265.1ABF1yCGTakrwartGAyawSaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0570.1ABF1GgmCACGTGGCmcrvvvgrArabidopsis thalianaSELEX
MA0266.1ABF2sTCTAGASaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0941.1ABF2cayrACACGTgktArabidopsis thalianaPBM
MA0930.1ABF3ACACGTGTArabidopsis thalianaPBM
MA0564.1ABI3ytGCATGCaArabidopsis thalianaPBM
MA0123.1abi4CGsyGCccccZea maysSELEX
MA0931.1ABI5bgmCACGTGkArabidopsis thalianaPBM
MA1244.1ABR1ggcgradrtkrCGGCGGmGArabidopsis thalianaDAP-seq
PF0103.1ACAWNRNSRCGGACAArrtGGCGGphylogenetic
PF0142.1ACAWYAAAGACAwyAAAGphylogenetic
PF0057.1ACCTGTTGACCTGTTGphylogenetic
MA0267.1ACE2mCCAGCaSaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0207.1achiTGACAGDrosophila melanogasterbacterial 1-hybrid
PF0004.1ACTAYRNNNCCCRACTACAwyTCCCAphylogenetic
PF0105.1ACTWSNACTNYACTACAACTCCphylogenetic
MA1277.1Adof1aaaaaraAAAAGtaraaaawrArabidopsis thalianaDAP-seq
MA0268.1ADR1aCCCCamSaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0269.1AFT1ttacatAkTGCACCCsmwwkgSaccharomyces cerevisiaePBM
MA0270.1AFT2sRCACCCsSaccharomyces cerevisiaePBM, CSA and/or DIP-chip
MA0005.1AGCCwaAwwkGGhArabidopsis thalianaSELEX
MA0005.2AGhTTwCCwWAwwdGGhAatArabidopsis thalianaSELEX
PF0135.1AGCYRWTTCAGCyrWTTCphylogenetic
MA0585.1AGL1wtTdCCwwwwtgGGwAarArabidopsis thalianaSELEX
MA1204.1AGL13WTwCYaAAAAwrGwAAawArabidopsis thalianaDAP-seq
MA0548.1AGL15TTTCywtTTTtGKawArabidopsis thalianaChIP-chip
MA0548.2AGL15cTTTCYwtWTTkGGwAAswArabidopsis thalianaDAP-seq
MA1199.1AGL16TTtCCwtWTTdGGwAArabidopsis thalianaDAP-seq
MA1200.1AGL25wcTTTCCwtwTttrgaaaArabidopsis thalianaDAP-seq
MA1012.1AGL27cTTTCyATTTTkGkArabidopsis thalianaChIP-seq
MA0001.1AGL3CCAwWwaTrGArabidopsis thalianaSELEX
MA0001.2AGL3skwwCCAwwwWwrGwwabArabidopsis thalianaSELEX
MA1201.1AGL42CATCATyArabidopsis thalianaDAP-seq
MA1202.1AGL55TCACCAArabidopsis thalianaDAP-seq
MA1205.1AGL6TTwCCaAAAAwRGaAAawwArabidopsis thalianaDAP-seq
MA1203.1AGL63TkCCAAAAAtGGmAAArabidopsis thalianaDAP-seq
MA0932.1AHL12AAwwwwTTArabidopsis thalianaPBM
MA0933.1AHL20AATWAAwTArabidopsis thalianaPBM
MA0934.1AHL25AwTTAAwTArabidopsis thalianaPBM
MA0006.1Ahr::ArntyGCGTGMus musculusSELEX


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