footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

Database 'SMILE-seq 1.0' (Transcription Factors 51-100)

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Accessions	Names	Organisms	Description and notes
SOX6	SOX6, SOX6_HUMAN	Homo sapiens	TF family: HMG
SP4	SP4, SP4_MOUSE	Mus musculus
SRY	Na(+)/H(+) exchange regulatory cofactor NHE-RF2, NHE3 kinase A regulatory protein NHERF-2, NHRF2_HUMAN, SIP-1, Sodium-hydrogen exchanger regulatory factor 2, Solute carrier family 9 isoform A3 regulatory factor 2, SRY, SRY-interacting protein 1, TKA-1, Tyrosine kinase activator protein 1	Homo sapiens	TF family: HMG
TCF7	T-cell factor 1, T-cell-specific transcription factor 1, TCF-1, TCF-7, TCF7, Transcription factor 7	Homo sapiens	TF family: HMG
TFE3	bHLHe33, Class E basic helix-loop-helix protein 33, TFE3, TFE3_HUMAN, TFE3_MOUSE, factor E3	Homo sapiens Mus musculus	TF family: bHLH; TF family:
Ttk	Protein tramtrack, beta isoform, Repressor protein fushi tarazu, Tramtrack p69, TTKB_DROME	Drosophila melanogaster
VDR	1,25-dihydroxyvitamin D3 receptor, Nuclear receptor subfamily 1 group I member VDR, VDR_HUMAN, Vitamin D3 receptor	Homo sapiens	TF family: Nuclear Receptor
VSX1	Homeodomain protein RINX, Retinal inner nuclear layer homeobox protein, Transcription VSX1, Visual system homeobox 1, VSX1, VSX1_HUMAN	Homo sapiens	TF family: homeobox
YY1	Delta transcription factor, INO80 complex subunit S, NF-E1, Transcriptional repressor YY1, TYY1_HUMAN, Yin and yang 1, YY-1, YY1	Homo sapiens	TF family: znfC2H2
ZEB1	Delta EF1, MEB1, TCF-8, Transcription factor 8, ZEB1, ZEB1_MOUSE, Zinc E-box-binding homeobox 1, Zinc finger homeobox protein 1a	Mus musculus
ZFP1	Zfp-1, ZFP1, ZFP1_HUMAN, Zinc finger protein 1 homolog, Zinc finger 475	Homo sapiens	TF family: KRAB+C2H9
ZFP14	Zfp-14, ZFP14, ZFP14_HUMAN, Zinc finger protein 14 homolog, Zinc finger 531	Homo sapiens	TF family: KRAB+C2H8
ZFP82	Zfp-82, ZFP82, ZFP82_HUMAN, Zinc finger protein 545, Zinc finger protein homolog	Homo sapiens	TF family: KRAB+C2H3
ZKSCAN1	Fragment, Q96FA2_HUMAN, ZKSCAN1, ZKSCAN1 protein	Homo sapiens	TF family: KRAB+SCAN+C2H2
ZNF135	B4DLZ7_HUMAN, cDNA FLJ56378, highly similar to Homo sapiens zinc finger 135, ZNF135	Homo sapiens	TF family: KRAB+C2H6
ZNF167	A7MAY2_HUMAN, Fragment, ZNF167, ZNF167 protein	Homo sapiens	TF family: KRAB+C2H4
ZNF282	Fragment, Q05BY5_HUMAN, ZNF282, ZNF282 protein	Homo sapiens	TF family: KRAB+C2H10
ZNF415	B3KTG1_HUMAN, cDNA FLJ38185 fis, clone FCBBF1000171, highly similar to Homo zinc finger protein 415, ZNF415	Homo sapiens	TF family: KRAB+C2H5
ZNF682	B9EG95_HUMAN, Zinc finger protein 682, Zinc finger protein 682, isoform ZNF682, ZNF682 protein	Homo sapiens	TF family: KRAB+C2H7
ZNF777	Fragment, Q3KR11_HUMAN, ZNF777, ZNF777 protein	Homo sapiens	TF family: KRAB+C2H2
ZSCAN4	Zinc finger and SCAN domain-containing protein 4, Zinc finger protein ZSCA4_HUMAN, ZSCAN4	Homo sapiens	TF family: SCAN+C2H2
Nfkb1
Smad4

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.

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