footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

Database 'HumanTF2 1.0' (Transcription Factors 51-100)

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Pages: 1, 2, 3

Accessions	Names	Organisms	Description and notes
GCM1_TF1	Chorion-specific transcription factor GCMa, GCM motif protein 1, GCM1, GCM1_HUMAN, cells missing homolog 1, hGCMa	Homo sapiens	Ensembl ID: ENSG00000137270; Construct type: TF1(SBP); TF family: GCM; Clone Jolma et al. 2013
GCM2_TF1	Chorion-specific transcription factor GCMb, GCM motif protein 2, GCM2, GCM2_HUMAN, cells missing homolog 2, hGCMb	Homo sapiens	Ensembl ID: ENSG00000124827; Construct type: TF1(SBP); TF family: GCM; Clone Jolma et al. 2013
GLI3_TF1 GLI3_TF2	GLI3, GLI3 C-terminally truncated form, GLI3 form of 190 kDa, form of 83 kDa, GLI3 full length protein, GLI3_HUMAN, GLI3-190, GLI3-83, GLI3FL, Transcriptional activator GLI3	Homo sapiens	Ensembl ID: ENSG00000106571; Construct type: TF1(SBP); TF family: znfC2H2; Clone Gene synthesis, Ensembl ID: ENSG00000106571; Construct type: TF2(3xFLAG); TF family: znfC2H2; Clone source: Gene synthesis
GSC2_TF2	GSC-2, GSC-L, GSC2, GSC2_HUMAN, Homeobox protein goosecoid-2, Homeobox protein goosecoid-like	Homo sapiens	Ensembl ID: ENSG00000063515; Construct type: TF2(3xFLAG); TF family: Homeodomain; Clone Jolma et al. 2013
HES1_TF1 HES1_TF2	bHLHb39, Class B basic helix-loop-helix protein 39, Hairy and enhancer split 1, Hairy homolog, Hairy-like protein, HES1, HES1_HUMAN, hHL, Transcription factor HES-1	Homo sapiens	Ensembl ID: ENSG00000114315; Construct type: TF1(SBP); TF family: bHLH; Clone Megaman, Ensembl ID: ENSG00000114315; Construct type: TF2(3xFLAG); TF family: bHLH; Clone source: Jolma et al. 2013
HES7_TF2	bHLH factor Hes7, bHLHb37, Class B basic helix-loop-helix protein 37, and enhancer of split 7, HES7, HES7_HUMAN, hHes7, Transcription factor HES-7	Homo sapiens	Ensembl ID: ENSG00000179111; Construct type: TF2(3xFLAG); TF family: bHLH; Clone Jolma et al. 2013
HOXA1_Full	Homeobox protein Hox-1F, Homeobox protein Hox-A1, HOXA1, HXA1_HUMAN	Homo sapiens	Ensembl ID: ENSG00000105991; Construct type: Full length protein used in with mixed proteins; TF family: Homeodomain; Clone source: Jolma et al. 2013
HOXA1_TF2	Homeobox protein Hox-1F, Homeobox protein Hox-A1, HOXA1, HXA1_HUMAN	Homo sapiens	Ensembl ID: ENSG00000105991; Construct type: TF2(3xFLAG); TF family: Homeodomain; Clone Jolma et al. 2013
HOXA10_TF2 Hoxa10_TF1	Homeobox protein Hox-A10, HOXA10, HOXA10 protein, Q5I0Y5_HUMAN	Homo sapiens Pantheropsis Guttatus	Ensembl ID: ENSG00000153807; Construct type: TF2(3xFLAG); TF family: Homeodomain-Posterior; Clone Jolma et al. 2013, Ensembl ID: ENSG00000153807; Construct type: TF1(SBP); TF family: Homeodomain-Posterior; Clone source: Gene synthesis
HOXA13_Full	Homeobox protein Hox-1J, Homeobox protein Hox-A13, HOXA13, HXA13_HUMAN	Homo sapiens	Ensembl ID: ENSG00000106031; Construct type: Full length protein used in with mixed proteins; TF family: Homeodomain-Posterior; Clone source: Jolma et al. 2013
HOXA13_TF2	Homeobox protein Hox-1J, Homeobox protein Hox-A13, HOXA13, HXA13_HUMAN	Homo sapiens	Ensembl ID: ENSG00000106031; Construct type: TF2(3xFLAG); TF family: Homeodomain-Posterior; Clone Jolma et al. 2013
HOXA2_TF2	Homeobox protein Hox-1K, Homeobox protein Hox-A2, HOXA2, HXA2_HUMAN	Homo sapiens	Ensembl ID: ENSG00000105996; Construct type: TF2(3xFLAG); TF family: Homeodomain; Clone Jolma et al. 2013
HOXA3_TF1 HOXA3_TF2	Homeobox protein Hox-1E, Homeobox protein Hox-A3, HOXA3, HXA3_HUMAN	Homo sapiens	Ensembl ID: ENSG00000105997; Construct type: TF1(SBP); TF family: Homeodomain; Clone Megaman, Ensembl ID: ENSG00000105997; Construct type: TF2(3xFLAG); TF family: Homeodomain; Clone source: Megaman
HOXA4_TF2	A1L0T6_HUMAN, HOXA4	Homo sapiens	Ensembl ID: ENSG00000197576; Construct type: TF2(3xFLAG); TF family: Homeodomain; Clone Gene synthesis
HOXA6_TF1	Homeobox protein Hox-1B, Homeobox protein Hox-A6, HOXA6, HXA6_HUMAN	Homo sapiens	Ensembl ID: ENSG00000106006; Construct type: TF1(SBP); TF family: Homeodomain; Clone Gene synthesis
HOXA7_TF1	Homeobox protein Hox 1.1, Homeobox protein Hox-1A, Homeobox protein Hox-A7, HXA7_HUMAN	Homo sapiens	Ensembl ID: ENSG00000122592; Construct type: TF1(SBP); TF family: Homeodomain; Clone Megaman
HOXB13_Full	HOXB13, HXB13_HUMAN	Homo sapiens	Ensembl ID: ENSG00000159184; Construct type: Full length protein used in with mixed proteins; TF family: Homeodomain-Posterior; Clone source: Jolma et al. 2013
HOXB13_TF1 HOXB13_TF2	HOXB13, HXB13_HUMAN	Homo sapiens	Ensembl ID: ENSG00000159184; Construct type: TF1(SBP); TF family: Homeodomain-Posterior; Clone Jolma et al. 2013, Ensembl ID: ENSG00000159184; Construct type: TF2(3xFLAG); TF family: Homeodomain-Posterior; Clone source: Jolma et al. 2013
HOXB2_TF1	Homeobox protein Hox-2.8, Homeobox protein Hox-2H, Homeobox protein Hox-B2, HOXB2, K8	Homo sapiens	Ensembl ID: ENSG00000173917; Construct type: TF1(SBP); TF family: Homeodomain; Clone Jolma et al. 2013
HOXC10_TF1	cDNA, FLJ94360, Homo sapiens homeo box C10 (HOXC10, Homeo box Homeobox C10, isoform CRA_a, HOXC10, Q53XI4_HUMAN	Homo sapiens	Ensembl ID: ENSG00000180818; Construct type: TF1(SBP); TF family: Homeodomain-Posterior; Clone Jolma et al. 2013
HOXD12_TF1	Epstein-Barr virus-induced protein 6, HOXD12, TNF receptor-associated factor 1, TRAF1_HUMAN	Homo sapiens	Ensembl ID: ENSG00000170178; Construct type: TF1(SBP); TF family: Homeodomain-Posterior; Clone Jolma et al. 2013
HOXD4_TF2	Homeobox protein HHO.C13, Homeobox protein Hox-4B, Homeobox protein Hox-5.1, Homeobox Hox-D4, HOXD4, HXD4_HUMAN	Homo sapiens	Ensembl ID: ENSG00000170166; Construct type: TF2(3xFLAG); TF family: Homeodomain; Clone Gene synthesis
IRF2_TF1	Interferon regulatory factor 2, IRF-2, IRF2, IRF2_HUMAN	Homo sapiens	Ensembl ID: ENSG00000168310; Construct type: TF1(SBP); TF family: IRF; Clone Megaman
JUN_TF2	Activator protein 1, AP1, JUN, JUN_HUMAN, p39, Proto-oncogene c-Jun, Transcription AP-1, V-jun avian sarcoma virus 17 oncogene homolog	Homo sapiens	Ensembl ID: ENSG00000177606; Construct type: TF2(3xFLAG); TF family: bZIP; Clone MGC
MAX_Full	CSAID-binding protein, CSBP, Cytokine suppressive anti-inflammatory drug-binding protein, EC 2.7.11.24, kinase 14, MAP kinase MXI2, MAP kinase p38 alpha, MAPK 14, MAX, MAX-interacting protein 2, Mitogen-activated protein kinase 14, Mitogen-activated protein kinase p38 alpha, MK14_HUMAN, SAPK2a, Stress-activated protein kinase 2a	Homo sapiens	Ensembl ID: ENSG00000125952; Construct type: Full length protein used in with mixed proteins; TF family: bHLH; Clone source: Jolma et al. 2013
MAX_TF2	CSAID-binding protein, CSBP, Cytokine suppressive anti-inflammatory drug-binding protein, EC 2.7.11.24, kinase 14, MAP kinase MXI2, MAP kinase p38 alpha, MAPK 14, MAX, MAX-interacting protein 2, Mitogen-activated protein kinase 14, Mitogen-activated protein kinase p38 alpha, MK14_HUMAN, SAPK2a, Stress-activated protein kinase 2a	Homo sapiens	Ensembl ID: ENSG00000125952; Construct type: TF2(3xFLAG); TF family: bHLH; Clone Jolma et al. 2013
MEIS1_Crystal	Homeobox protein Meis2, MEIS1, Meis1-related protein 1, MEIS2_HUMAN	Homo sapiens	Ensembl ID: ENSG00000143995; Construct type: Crystal; TF family: Homeodomain-TALE; Clone Gene synthesis
MEIS1_TF1	Homeobox protein Meis2, MEIS1, Meis1-related protein 1, MEIS2_HUMAN	Homo sapiens	Ensembl ID: ENSG00000143995; Construct type: TF1(SBP); TF family: HomeodomainTALE; Clone Jolma et al. 2013
MEIS2_Full	Homeobox protein Meis2, Meis1-related protein 1, MEIS2, MEIS2_HUMAN	Homo sapiens	Ensembl ID: ENSG00000134138; Construct type: Full length protein used in with mixed proteins; TF family: HomeodomainTALE; Clone source: Jolma et al. 2013
MEIS2_TF1	Homeobox protein Meis2, Meis1-related protein 1, MEIS2, MEIS2_HUMAN	Homo sapiens	Ensembl ID: ENSG00000134138; Construct type: TF1(SBP); TF family: HomeodomainTALE; Clone Jolma et al. 2013
MGA_TF1	B9EGR5_HUMAN, MGA	Homo sapiens	Ensembl ID: ENSG00000174197; Construct type: TF1(SBP); TF family: Tbox; Clone Jolma et al. 2013
MYBL1_TF1	A-Myb, Myb-like protein 1, Myb-related protein A, MYBA_HUMAN, MYBL1	Homo sapiens	Ensembl ID: ENSG00000185697; Construct type: TF1(SBP); TF family: SANT; Clone Jolma et al. 2013
MYCL2_TF2	MYCL2, MYCP1_HUMAN, Protein L-Myc-2, Putative myc-like protein MYCLP1, V-myc myelocytomatosis oncogene homolog pseudogene 1	Homo sapiens	Ensembl ID: ENSG00000204053; Construct type: TF2(3xFLAG); TF family: bHLH; Clone Gene synthesis
NHLH1_TF2	cDNA, FLJ94293, Homo sapiens nescient helix loop helix 1 (NHLH1, helix loop helix 1, NHLH1, Q5T203_HUMAN	Homo sapiens	Ensembl ID: ENSG00000171786; Construct type: TF2(3xFLAG); TF family: bHLH; Clone Jolma et al. 2013
NR1D2_TF2	NR1D2, NR1D2 protein, Nuclear receptor subfamily 1 group D member Q6NSM0_HUMAN	Homo sapiens	Ensembl ID: ENSG00000174738; Construct type: TF2(3xFLAG); TF family: Nuclear_receptor; Clone MGC
NR1I2_TF1	NR1I2, NR1I2_HUMAN, Nuclear receptor subfamily 1 group I member 2, nuclear receptor PAR1, Orphan nuclear receptor PXR, Pregnane X receptor, Steroid and xenobiotic receptor, SXR	Homo sapiens	Ensembl ID: ENSG00000144852; Construct type: TF1(SBP); TF family: Nuclear_receptor; Clone Megaman
ONECUT2_Full	Hepatocyte nuclear factor 6-beta, HNF-6-beta, OC-2, One cut domain family 2, One cut homeobox 2, ONEC2_HUMAN, ONECUT2, Transcription factor ONECUT-2	Homo sapiens	Ensembl ID: ENSG00000119547; Construct type: Full length protein used in with mixed proteins; TF family: Homeodomain_Cut; Clone source: Jolma et al. 2013
ONECUT2_TF2	Hepatocyte nuclear factor 6-beta, HNF-6-beta, OC-2, One cut domain family 2, One cut homeobox 2, ONEC2_HUMAN, ONECUT2, Transcription factor ONECUT-2	Homo sapiens	Ensembl ID: ENSG00000119547; Construct type: TF2(3xFLAG); TF family: Homeodomain_Cut; Clone Jolma et al. 2013
PAX1_TF2	HuP48, Paired box protein Pax-1, PAX1, PAX1_HUMAN	Homo sapiens	Ensembl ID: ENSG00000125813; Construct type: TF2(3xFLAG); TF family: PAX; Clone Jolma et al. 2013
PAX3_TF1	HuP2, Paired box protein Pax-3, PAX3, PAX3_HUMAN	Homo sapiens	Ensembl ID: ENSG00000135903; Construct type: TF1(SBP); TF family: PAX+Homeodomain; Clone Jolma et al. 2013
PAX5_TF1 PAX5_TF2	B-cell-specific transcription factor, BSAP, Paired box protein Pax-5, PAX5, PAX5_HUMAN	Homo sapiens	Ensembl ID: ENSG00000196092; Construct type: TF1(SBP); TF family: PAX; Clone Jolma et al. 2013, Ensembl ID: ENSG00000196092; Construct type: TF2(3xFLAG); TF family: PAX; Clone source: Jolma et al. 2013
PAX9_TF1	PAX9, PAX9_HUMAN	Homo sapiens	Ensembl ID: ENSG00000198807; Construct type: TF1(SBP); TF family: PAX; Clone Jolma et al. 2013
PAX9_TF2	PAX9, PAX9_HUMAN	Homo sapiens	Ensembl ID: ENSG00000198807; Construct type: TF2(3xFLAG); TF family: PAX; Clone Jolma et al. 2013
PBX4_TF1	Homeobox protein PBX4, PBX4, PBX4_HUMAN, Pre-B-cell leukemia transcription factor 4	Homo sapiens	Ensembl ID: ENSG00000105717; Construct type: TF1(SBP); TF family: HomeodomainTALE; Clone Gene synthesis
PITX1_TF1 PITX1_TF2	Hindlimb-expressed homeobox protein backfoot, Homeobox protein PITX1, Paired-like homeodomain transcription 1, Pituitary homeobox 1, PITX1, PITX1_HUMAN	Homo sapiens	Ensembl ID: ENSG00000069011; Construct type: TF1(SBP); TF family: Homeodomain; Clone Jolma et al. 2013, Ensembl ID: ENSG00000069011; Construct type: TF2(3xFLAG); TF family: Homeodomain; Clone source: Jolma et al. 2013
POU2F1_TF1	NF-A1, Oct-1, Octamer-binding protein 1, Octamer-binding transcription factor 1, OTF-1, POU domain, class 2, transcription factor 1, POU2F1	Homo sapiens	Ensembl ID: ENSG00000143190; Construct type: TF1(SBP); TF family: POU+Homeodomain; Clone Jolma et al. 2013
POU5F1_TF1 POU5F1_TF2	Oct-3, Oct-4, Octamer-binding protein 3, Octamer-binding protein 4, Octamer-binding transcription 3, OTF-3, PO5F1_HUMAN, POU domain, class 5, transcription factor 1, POU5F1	Homo sapiens	Ensembl ID: ENSG00000204531; Construct type: TF1(SBP); TF family: POU+Homeodomain; Clone Gene synthesis, Ensembl ID: ENSG00000204531; Construct type: TF2(3xFLAG); TF family: POU+Homeodomain; Clone source: Gene synthesis
RFX3_TF1	Regulatory factor X 3, RFX3, RFX3_HUMAN, Transcription factor RFX3	Homo sapiens	Ensembl ID: ENSG00000080298; Construct type: TF1(SBP); TF family: RFX; Clone Jolma et al. 2013
RFX5_TF2	DNA-binding protein RFX5, Regulatory factor X 5, RFX5, RFX5_HUMAN	Homo sapiens	Ensembl ID: ENSG00000143390; Construct type: TF2(3xFLAG); TF family: RFX; Clone Jolma et al. 2013
RORB_TF1	cDNA, FLJ93970, Homo sapiens RAR-related orphan receptor B (RORB, Q58EY0_HUMAN, orphan receptor B, RAR-related orphan receptor beta, RORB	Homo sapiens	Ensembl ID: ENSG00000198963; Construct type: TF1(SBP); TF family: Nuclear_receptor; Clone Megaman

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.

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