footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

Database 'HumanTF2 1.0' (Transcription Factors 1-50)

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Pages: 1, 2, 3

Accessions	Names	Organisms	Description and notes
ALX4_TF1	ALX4, ALX4_HUMAN	Homo sapiens	Ensembl ID: ENSG00000052850; Construct type: TF1(SBP); TF family: Homeodomain; Clone Jolma et al. 2013
ALX4_TF2	ALX4, ALX4_HUMAN	Homo sapiens	Ensembl ID: ENSG00000052850; Construct type: TF2(3xFLAG); TF family: Homeodomain; Clone Jolma et al. 2013
ARNTL_TF1	ARNTL, B2RCL8_HUMAN	Homo sapiens	Ensembl ID: ENSG00000133794; Construct type: TF1(SBP); TF family: bHLH; Clone Jolma et al. 2013
ATF4_TF1 ATF4_TF2	Activating transcription factor 4, ATF4, ATF4_HUMAN, cAMP-dependent transcription factor ATF-4, element-binding protein 2, CREB-2, Cyclic AMP-dependent transcription factor ATF-4, Cyclic AMP-responsive element-binding protein 2, DNA-binding protein TAXREB67, Tax-responsive enhancer element-binding protein 67	Homo sapiens	Ensembl ID: ENSG00000128272; Construct type: TF1(SBP); TF family: bZIP; Clone Jolma et al. 2013, Ensembl ID: ENSG00000128272; Construct type: TF2(3xFLAG); TF family: bZIP; Clone source: Jolma et al. 2013
BACH1_TF2	BACH1, BACH1_HUMAN, BTB and CNC homolog 1, HA2303, Transcription regulator BACH1	Homo sapiens	Ensembl ID: ENSG00000156273; Construct type: TF2(3xFLAG); TF family: bZIP; Clone MGC
BHLHA15_TF2	BHA15_HUMAN, BHLHA15, bHLHb8, Class A basic helix-loop-helix protein 15, Class basic helix-loop-helix protein 8, MIST-1, Muscle, intestine and stomach expression 1	Homo sapiens	Ensembl ID: ENSG00000180535; Construct type: TF2(3xFLAG); TF family: bHLH; Clone Jolma et al. 2013
CEBPB_TF2	CEBPB, CEBPB protein, Fragment, Q9BSC0_HUMAN	Homo sapiens	Ensembl ID: ENSG00000172216; Construct type: TF2(3xFLAG); TF family: bZIP; Clone Jolma et al. 2013
CEBPD_TF2	CEBPD, Q504X4_HUMAN	Homo sapiens	Ensembl ID: ENSG00000221869; Construct type: TF2(3xFLAG); TF family: bZIP; Clone Jolma et al. 2013
CEBPG_TF1	C/EBP gamma, CCAAT/enhancer-binding protein gamma, CEBPG, CEBPG_HUMAN	Homo sapiens	Ensembl ID: ENSG00000153879; Construct type: TF1(SBP); TF family: bZIP; Clone Jolma et al. 2013
CLOCK_TF1 CLOCK_TF2	Circadian clock protein PERIOD 1, Circadian pacemaker protein Rigui, CLOCK, PER1_HUMAN, Period circadian protein homolog 1	Homo sapiens	Ensembl ID: ENSG00000134852; Construct type: TF1(SBP); TF family: bHLH; Clone Jolma et al. 2013, Ensembl ID: ENSG00000134852; Construct type: TF2(3xFLAG); TF family: bHLH; Clone source: Jolma et al. 2013
CREB3L1_TF1 CREB3L1_TF2	B2RA75_HUMAN, cDNA, FLJ94739, highly similar to Homo sapiens cAMP responsive binding protein 3-like 1, CREB3L1	Homo sapiens	Ensembl ID: ENSG00000157613; Construct type: TF1(SBP); TF family: bZIP; Clone Jolma et al. 2013, Ensembl ID: ENSG00000157613; Construct type: TF2(3xFLAG); TF family: bZIP; Clone source: Jolma et al. 2013
CUX1_TF1	CCAAT displacement protein, CDP, CUX1, CUX1_HUMAN, Homeobox protein cut-like 1, protein cux-1	Homo sapiens	Ensembl ID: ENSG00000160967; Construct type: TF1(SBP); TF family: Homeodomain+Cut; Clone Jolma et al. 2013
DLX2_Full	DLX2, DLX2_HUMAN	Homo sapiens	Ensembl ID: ENSG00000115844; Construct type: Full length protein used in with mixed proteins; TF family: Homeodomain; Clone source: Jolma et al. 2013
DLX2_TF2	DLX2, DLX2_HUMAN	Homo sapiens	Ensembl ID: ENSG00000115844; Construct type: TF2(3xFLAG); TF family: Homeodomain; Clone Jolma et al. 2013
DLX3_Crystal	DLX3, DLX3_HUMAN	Homo sapiens	Ensembl ID: ENSG00000064195; Construct type: Crystal; TF family: Homeodomain; Clone Gene synthesis
DLX3_Full	DLX3, DLX3_HUMAN	Homo sapiens	Ensembl ID: ENSG00000064195; Construct type: Full length protein used in with mixed proteins; TF family: Homeodomain; Clone source: Jolma et al. 2013
DLX3_TF2	DLX3, DLX3_HUMAN	Homo sapiens	Ensembl ID: ENSG00000064195; Construct type: TF2(3xFLAG); TF family: Homeodomain; Clone Jolma et al. 2013
DRGX_TF2	Dorsal root ganglia homeobox protein, DRGX, DRGX_HUMAN, Paired-related homeobox protein-like	Homo sapiens	Ensembl ID: ENSG00000165606; Construct type: TF2(3xFLAG); TF family: Homeodomain; Clone Jolma et al. 2013
E2F1_TF1	E2F-1, E2F1, E2F1_HUMAN, PBR3, pRB-binding protein E2F-1, RBAP-1, RBBP-3, Retinoblastoma-associated 1, Retinoblastoma-binding protein 3, Transcription factor E2F1	Homo sapiens	Ensembl ID: ENSG00000101412; Construct type: TF1(SBP); TF family: E2F; Clone Jolma et al. 2013
E2F3_TF1	E2F-3, E2F3, E2F3_HUMAN, Transcription factor E2F3	Homo sapiens	Ensembl ID: ENSG00000112242; Construct type: TF1(SBP); TF family: E2F; Clone Jolma et al. 2013
E2F8_TF2	E2F-8, E2F8, E2F8_HUMAN, Transcription factor E2F8	Homo sapiens	Ensembl ID: ENSG00000129173; Construct type: TF2(3xFLAG); TF family: E2F; Clone Jolma et al. 2013
ELF1_TF2	E74-like factor 4, ELF1, ELF4_HUMAN, ETS-related transcription factor Elf-4, Myeloid factor	Homo sapiens	Ensembl ID: ENSG00000120690; Construct type: TF2(3xFLAG); TF family: ETS; Clone Jolma et al. 2013
ELF2_TF2	E74-like factor 2, ELF2, ELF2_HUMAN, ETS-related transcription factor Elf-2, New factor	Homo sapiens	Ensembl ID: ENSG00000109381; Construct type: TF2(3xFLAG); TF family: ETS; Clone MGC
ELK1_Full	ELK1, ELK1_HUMAN	Homo sapiens	Ensembl ID: ENSG00000126767; Construct type: Full length protein used in with mixed proteins; TF family: ETS; Clone source: Jolma et al. 2013
ELK1_TF1	ELK1, ELK1_HUMAN	Homo sapiens	Ensembl ID: ENSG00000126767; Construct type: TF1(SBP); TF family: ETS; Clone Jolma et al. 2013
ELK1_TF2	ELK1, ELK1_HUMAN	Homo sapiens	Ensembl ID: ENSG00000126767; Construct type: TF2(3xFLAG); TF family: ETS; Clone Jolma et al. 2013
ELK3_TF2	ELK3, ELK3_HUMAN, ETS domain-containing protein Elk-3, ETS-related protein ERP, ETS-related NET, SAP-2, Serum response factor accessory protein 2, SRF accessory protein 2	Homo sapiens	Ensembl ID: ENSG00000111145; Construct type: TF2(3xFLAG); TF family: ETS; Clone Jolma et al. 2013
EOMES_TF2	EOMES, EOMES_HUMAN, Eomesodermin homolog, T-box brain protein 2, T-brain-2, TBR-2	Homo sapiens	Ensembl ID: ENSG00000163508; Construct type: TF2(3xFLAG); TF family: Tbox; Clone Jolma et al. 2013
ERF_TF1	Activating enhancer-binding protein 2 gamma, AP2-gamma, AP2C_HUMAN, ERF, Transcription factor gamma, Transcription factor ERF-1	Homo sapiens	Ensembl ID: ENSG00000105722; Construct type: TF1(SBP); TF family: ETS; Clone Jolma et al. 2013
ERG_TF1 ERG_TF2	Eag homolog, Eag-related protein 1, ERG, ERG-1, Ether-a-go-go-related gene potassium 1, Ether-a-go-go-related protein 1, H-ERG, hERG-1, hERG1, KCNH2_HUMAN, Potassium voltage-gated channel subfamily H member 2, Voltage-gated potassium channel subunit Kv11.1	Homo sapiens	Ensembl ID: ENSG00000157554; Construct type: TF1(SBP); TF family: ETS; Clone Jolma et al. 2013, Ensembl ID: ENSG00000157554; Construct type: TF2(3xFLAG); TF family: ETS; Clone source: Jolma et al. 2013
ESRRB_TF1 ESRRB_TF2	ERR beta-2, ERR-beta, ERR2_HUMAN, ESRRB, Estrogen receptor-like 2, Estrogen-related receptor Nuclear receptor subfamily 3 group B member 2, Steroid hormone receptor ERR2	Homo sapiens	Ensembl ID: ENSG00000119715; Construct type: TF1(SBP); TF family: Nuclear_receptor; Clone Jolma et al. 2013, Ensembl ID: ENSG00000119715; Construct type: TF2(3xFLAG); TF family: Nuclear_receptor; Clone source: Jolma et al. 2013
ETS2_TF1	ETS2, ETS2_HUMAN	Homo sapiens	Ensembl ID: ENSG00000157557; Construct type: TF1(SBP); TF family: ETS; Clone Megaman
ETV1_TF2	ETS translocation variant 1, Ets-related protein 81, ETV1, ETV1_HUMAN	Homo sapiens	Ensembl ID: ENSG00000006468; Construct type: TF2(3xFLAG); TF family: ETS; Clone Jolma et al. 2013
ETV2_TF1	ETS translocation variant 2, ETV2, ETV2 protein, Q3KNT2_HUMAN	Homo sapiens	Ensembl ID: ENSG00000105672; Construct type: TF1(SBP); TF family: ETS; Clone Jolma et al. 2013
ETV4_TF2	Adenovirus E1A enhancer-binding protein, E1A-F, ETS translocation variant 4, ETV4, Polyomavirus enhancer activator 3 homolog, Protein PEA3	Homo sapiens	Ensembl ID: ENSG00000175832; Construct type: TF2(3xFLAG); TF family: ETS; Clone Jolma et al. 2013
ETV5_TF1	ETS translocation variant 5, Ets-related protein ERM, ETV5, ETV5_HUMAN	Homo sapiens	Ensembl ID: ENSG00000171656; Construct type: TF1(SBP); TF family: ETS; Clone Jolma et al. 2013
ETV7_TF1 ETV7_TF2	ETS translocation variant 7, ETS-related protein Tel2, ETV7, ETV7_HUMAN, Tel-related factor, Transcription factor ETV7, Transcription factor Tel-2	Homo sapiens	Ensembl ID: ENSG00000010030; Construct type: TF1(SBP); TF family: ETS; Clone Megaman, Ensembl ID: ENSG00000010030; Construct type: TF2(3xFLAG); TF family: ETS; Clone source: Megaman
EVX1_TF1 EVX1_TF2	EVX-1, EVX1, EVX1_HUMAN, Homeobox even-skipped homolog protein 1	Homo sapiens	Ensembl ID: ENSG00000106038; Construct type: TF1(SBP); TF family: Homeodomain; Clone Jolma et al. 2013, Ensembl ID: ENSG00000106038; Construct type: TF2(3xFLAG); TF family: Homeodomain; Clone source: Jolma et al. 2013
FIGLA_TF2	bHLHb21, Class B basic helix-loop-helix protein 21, FIGLA, Immunoglobulin enhancer-binding E12/E47, Immunoglobulin transcription factor 1, Kappa-E2-binding factor, TCF-3, TFE2_HUMAN, Transcription factor 3, Transcription factor E2-alpha, Transcription factor ITF-1	Homo sapiens	Ensembl ID: ENSG00000183733; Construct type: TF2(3xFLAG); TF family: bHLH; Clone Jolma et al. 2013
FLI1_Full	FLI1, FLI1_HUMAN, Friend leukemia integration 1 transcription factor, Proto-oncogene Fli-1, factor ERGB	Homo sapiens	Ensembl ID: ENSG00000151702; Construct type: Full length protein used in with mixed proteins; TF family: ETS; Clone source: Jolma et al. 2013
FLI1_TF2	FLI1, FLI1_HUMAN, Friend leukemia integration 1 transcription factor, Proto-oncogene Fli-1, factor ERGB	Homo sapiens	Ensembl ID: ENSG00000151702; Construct type: TF2(3xFLAG); TF family: ETS; Clone Jolma et al. 2013
FOS_TF1	Cellular oncogene fos, FOS, FOS_HUMAN, G0/G1 switch regulatory protein 7, c-Fos	Homo sapiens	Ensembl ID: ENSG00000170345; Construct type: TF1(SBP); TF family: bZIP; Clone MGC
FOXA1_TF1	Forkhead box protein A1, FOXA1, FOXA1_HUMAN, Hepatocyte nuclear factor 3-alpha, HNF-3A, TCF-3A, Transcription factor 3A	Homo sapiens	Ensembl ID: ENSG00000129514; Construct type: TF1(SBP); TF family: Forkhead; Clone Gene synthesis
FOXI1_TF2	A8K811_HUMAN, cDNA FLJ76677, highly similar to Homo sapiens forkhead box FOXI1	Homo sapiens	Ensembl ID: ENSG00000168269; Construct type: TF2(3xFLAG); TF family: Forkhead; Clone Jolma et al. 2013
FOXJ2_TF1	Fork head homologous X, Forkhead box protein J2, FOXJ2, FOXJ2_HUMAN	Homo sapiens	Ensembl ID: ENSG00000065970; Construct type: TF1(SBP); TF family: Forkhead; Clone Jolma et al. 2013
FOXJ3_TF1	FOXJ3, FOXJ3_HUMAN	Homo sapiens	Ensembl ID: ENSG00000198815; Construct type: TF1(SBP); TF family: Forkhead; Clone Jolma et al. 2013
FOXO1_TF1 FOXO1_TF2	FOXO1, L8E9Y8_HUMAN	Homo sapiens	Ensembl ID: ENSG00000150907; Construct type: TF1(SBP); TF family: Forkhead; Clone Jolma et al. 2013, Ensembl ID: ENSG00000150907; Construct type: TF2(3xFLAG); TF family: Forkhead; Clone source: Jolma et al. 2013
FOXO6_TF2	FOXO6, Hepatocyte nuclear factor 4-alpha, HNF-4-alpha, HNF4A_HUMAN, Nuclear receptor subfamily group A member 1, TCF-14, Transcription factor 14, Transcription factor HNF-4	Homo sapiens	Ensembl ID: ENSG00000204060; Construct type: TF2(3xFLAG); TF family: Forkhead; Clone Jolma et al. 2013
GATA1_TF1	Eryf1, Erythroid transcription factor, GATA-1, GATA-binding factor 1, GATA1, GATA1_HUMAN, NF-E1 DNA-binding protein	Homo sapiens	Ensembl ID: ENSG00000102145; Construct type: TF1(SBP); TF family: znfGATA; Clone Megaman

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.

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