footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

Database 'HOCOMOCO 10' (DNA Binding Motifs 351-400)

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Pages: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15

Accessions	Names	Consensus	Organisms	Description and notes
P73_HUMAN.H10MO.A\|M01415	TP73	rgrCAwGyytGgrCwTGyyy	Homo sapiens	p53-related factors{6.3.1}; p73{6.3.1.0.3}
USF1_HUMAN.H10MO.A\|M01591 USF1_MOUSE.H10MO.A\|M01405	USF1	gGTCACGTGr	Homo sapiens Mus musculus	bHLH-ZIP factors{1.2.6}; USF factors{1.2.6.2}
USF2_HUMAN.H10MO.A\|M01592	USF2	ggGTCACGTGrssvsssss	Homo sapiens	bHLH-ZIP factors{1.2.6}; USF factors{1.2.6.2}
USF2_MOUSE.H10MO.A\|M01406	Usf2	gGTCACGTGryss	Mus musculus	bHLH-ZIP factors{1.2.6}; USF factors{1.2.6.2}
VDR_HUMAN.H10MO.B\|M01595	VDR	rrGGtCAswGrGktca	Homo sapiens	Thyroid hormone receptor-related factors (NR1){2.1.2}; Vitamin D receptor (NR1I){2.1.2.4}
VDR_MOUSE.H10MO.C\|M01407	Vdr	rGGTCAwsrrGkTCac	Mus musculus	Thyroid hormone receptor-related factors (NR1){2.1.2}; Vitamin D receptor (NR1I){2.1.2.4}
XBP1_HUMAN.H10MO.C\|M01601 XBP1_MOUSE.H10MO.C\|M01411	XBP1	GACGTGkCmtww	Homo sapiens Mus musculus	XBP-1-related factors{1.1.5}; XBP-1{1.1.5.0.1}
TYY1_HUMAN.H10MO.A\|M01587 TYY1_MOUSE.H10MO.A\|M01403	YY1	cAArATGGCggc	Homo sapiens Mus musculus	More than 3 adjacent zinc finger factors{2.3.3}; YY1-like factors{2.3.3.9}
KAISO_HUMAN.H10MO.A\|M01284	ZBTB33	gtTctCGCGAGrstysggs	Homo sapiens	Other factors with up to three adjacent zinc fingers{2.3.2}; Factors 2-3 adjacent zinc fingersand a BTB/POZ domain{2.3.2.1}
KAISO_HUMAN.H10MO.S\|M01285 KAISO_MOUSE.H10MO.B\|M01184	Zbtb33	yTsGCrrGArkw	Mus musculus	Other factors with up to three adjacent zinc fingers{2.3.2}; Factors 2-3 adjacent zinc fingersand a BTB/POZ domain{2.3.2.1}
ZEB1_HUMAN.H10MO.B\|M01611	ZEB1	tvCAGGTrwrs	Homo sapiens	HD-ZF factors{3.1.8}; ZEB{3.1.8.3}
ZFX_HUMAN.H10MO.C\|M01615 ZFX_MOUSE.H10MO.C\|M01420	ZFX	svsssscscAGGCCbsGsc	Homo sapiens Mus musculus	More than 3 adjacent zinc finger factors{2.3.3}; ZFX/ZFY factors{2.3.3.65}
ZIC1_HUMAN.H10MO.B\|M01616 ZIC1_MOUSE.H10MO.B\|M01421	ZIC1	kGGGwGGks	Homo sapiens Mus musculus	More than 3 adjacent zinc finger factors{2.3.3}; GLI-like factors{2.3.3.1}
ZIC2_HUMAN.H10MO.C\|M01617 ZIC2_MOUSE.H10MO.C\|M01422	ZIC2	kGGGtGGTc	Homo sapiens Mus musculus	More than 3 adjacent zinc finger factors{2.3.3}; GLI-like factors{2.3.3.1}
ZIC3_HUMAN.H10MO.C\|M01618 ZIC3_MOUSE.H10MO.C\|M01423	ZIC3	yGGGtGgyc	Homo sapiens Mus musculus	More than 3 adjacent zinc finger factors{2.3.3}; GLI-like factors{2.3.3.1}
ZKSC1_HUMAN.H10MO.C\|M01620	ZKSCAN1	ccygGCACAyAGTAGGtsctca	Homo sapiens	More than 3 adjacent zinc finger factors{2.3.3}; ZNF24-like factors{2.3.3.10}
ZN143_HUMAN.H10MO.A\|M01622 ZN143_MOUSE.H10MO.D\|M01424	ZNF143	kcrwkGCAtkmTGGGArdtvyw	Homo sapiens	More than 3 adjacent zinc finger factors{2.3.3}; ZNF76-like factors{2.3.3.28}
ZN350_HUMAN.H10MO.C\|M01628	ZNF350	asGGGvvgcArdkvkyTkkkksCs	Homo sapiens	More than 3 adjacent zinc finger factors{2.3.3}; ZNF350-like factors{2.3.3.30}
ZN384_HUMAN.H10MO.C\|M01629	ZNF384	gsAAAAAvycks	Homo sapiens	More than 3 adjacent zinc finger factors{2.3.3}; ZNF362-like factors{2.3.3.37}
ALX3_HUMAN.H10MO.D\|M01004		TAAtyYAATTA
ALX4_HUMAN.H10MO.D\|M01005		TAATyTAATTAr
AP2D_HUMAN.H10MO.D\|M01010 AP2D_MOUSE.H10MO.D\|M01008		cGcCyGrGGCgCGt
ARI3A_HUMAN.H10MO.D\|M01011 ARI3A_MOUSE.H10MO.D\|M01009		rATTAAwyrrwATcWAAwtwww
ARI3A_HUMAN.H10MO.S\|M01012 ARI3A_MOUSE.H10MO.S\|M01010		rATTAAA
ARNT2_HUMAN.H10MO.D\|M01014 ARNT2_MOUSE.H10MO.D\|M01012		gscGTGGsrsrc
ARX_HUMAN.H10MO.D\|M01016		yTAATyYAATTAr
ASCL2_HUMAN.H10MO.D\|M01017		gkkrGyrGswGgkk
ATF7_HUMAN.H10MO.D\|M01022		grTGACGTCAT
ATOH1_HUMAN.H10MO.D\|M01023		yrmCATATGyy
BARH1_HUMAN.H10MO.D\|M01025		TAAwyGsysyTAA
BARH2_HUMAN.H10MO.D\|M01026		gyTAAwyGgysywwwwwg
BARX1_HUMAN.H10MO.D\|M01027		TAATyGkTwTTTAATkg
BARX2_HUMAN.H10MO.D\|M01028 BARX2_MOUSE.H10MO.D\|M01019		tyrwTAATkr
BATF3_HUMAN.H10MO.D\|M01029		ywtyryTTACGk
BATF_HUMAN.H10MO.S\|M01031 BATF_MOUSE.H10MO.B\|M01020	Batf	mTGAGTCAkw	Mus musculus	B-ATF-related factors{1.1.4}; B-ATF{1.1.4.0.1}
BCL6B_HUMAN.H10MO.D\|M01033		myGCTTTCkAG
BHA15_HUMAN.H10MO.D\|M01035		ywCCATATGkT
BHE22_HUMAN.H10MO.D\|M01036		amCATATGTTTtt
BHE23_HUMAN.H10MO.D\|M01037		rgsrtrTGktkk
BHE41_HUMAN.H10MO.D\|M01039 BHE41_MOUSE.H10MO.D\|M01023		wsvrksyCAcGTGmwGrrrs
BPTF_HUMAN.H10MO.D\|M01041		kktkTTGTkkks
BRAC_HUMAN.H10MO.D\|M01042 BRAC_MOUSE.H10MO.D\|M01025		rsAwwrTGACACCTAGGTGTsAAAw
BRCA1_HUMAN.H10MO.D\|M01043 BRCA1_MOUSE.H10MO.D\|M01026		kkTskGTTG
BSH_HUMAN.H10MO.D\|M01044		ymATTAacymaTta
CDC5L_HUMAN.H10MO.D\|M01045 CDC5L_MOUSE.H10MO.D\|M01027		gkGwktTAAyrTAwy
CEBPZ_HUMAN.H10MO.D\|M01053 CEBPZ_MOUSE.H10MO.D\|M01036		dCTsATTGGCT
CENPB_HUMAN.H10MO.D\|M01054		TTCGywskAhgCGGGww
CLOCK_HUMAN.H10MO.D\|M01055		ggwkkggwgrsrcGkGTrrr
COT1_HUMAN.H10MO.S\|M01058 COT1_MOUSE.H10MO.S\|M01039		GktCArRGkTCA
COT2_HUMAN.H10MO.S\|M01060 COT2_MOUSE.H10MO.S\|M01041		rrGGtCArrGgtcaa

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.

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