Database 'HOCOMOCO 10' (DNA Binding Motifs 1-50)
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Pages: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15
Accessions | Names | Consensus | Organisms | Description and notes |
---|---|---|---|---|
AHR_HUMAN.H10MO.B|M01001 AHR_MOUSE.H10MO.B|M01001 | AHR | dtyGCGTGm | Homo sapiens Mus musculus | PAS domain factors{1.2.5}; Ahr-like factors{1.2.5.1} |
AIRE_HUMAN.H10MO.C|M01002 AIRE_MOUSE.H10MO.C|M01002 | AIRE | mttGGwwwwawtGGttwm | Homo sapiens Mus musculus | AIRE{5.3.1}; AIRE{5.3.1.0.1} |
ALX1_HUMAN.H10MO.B|M01003 ALX1_MOUSE.H10MO.B|M01003 | ALX1 | rTAATtrvATTA | Homo sapiens Mus musculus | Paired-related HD factors{3.1.3}; ALX{3.1.3.1} |
ANDR_HUMAN.H10MO.A|M01006 | AR | dGyACabwcTGTtCytk | Homo sapiens | Steroid hormone receptors (NR3){2.1.1}; GR-like receptors (NR3C){2.1.1.1} |
ANDR_MOUSE.H10MO.B|M01004 | Ar | rGwACAbrryGTkCyt | Mus musculus | Steroid hormone receptors (NR3){2.1.1}; GR-like receptors (NR3C){2.1.1.1} |
ARI5B_HUMAN.H10MO.C|M01013 ARI5B_MOUSE.H10MO.C|M01011 | ARID5B | ksykdgTATTskr | Homo sapiens Mus musculus | ARID-related factors{3.7.1}; ARID5{3.7.1.5} |
ARNT_HUMAN.H10MO.B|M01015 ARNT_MOUSE.H10MO.B|M01013 | ARNT | tyrCGTGc | Homo sapiens Mus musculus | PAS domain factors{1.2.5}; Arnt-like factors{1.2.5.2} |
BMAL1_HUMAN.H10MO.C|M01040 BMAL1_MOUSE.H10MO.C|M01024 | ARNTL | kGrwCACGTGRCys | Homo sapiens Mus musculus | PAS domain factors{1.2.5}; Arnt-like factors{1.2.5.2} |
ATF1_HUMAN.H10MO.B|M01018 | ATF1 | krTGAcKtmak | Homo sapiens | CREB-related factors{1.1.7}; CREB-like factors{1.1.7.1} |
ATF1_MOUSE.H10MO.B|M01014 | Atf1 | vTGACGTsAs | Mus musculus | CREB-related factors{1.1.7}; CREB-like factors{1.1.7.1} |
ATF2_HUMAN.H10MO.B|M01019 ATF2_MOUSE.H10MO.B|M01015 | ATF2 | rTGACGTmA | Homo sapiens Mus musculus | Jun-related factors{1.1.1}; ATF-2-like factors{1.1.1.3} |
ATF3_HUMAN.H10MO.A|M01020 ATF3_MOUSE.H10MO.A|M01016 | ATF3 | gTGAykyma | Homo sapiens Mus musculus | Fos-related factors{1.1.2}; ATF-3-like factors{1.1.2.2} |
ATF6A_HUMAN.H10MO.B|M01021 | ATF6 | gkssTGACGTGG | Homo sapiens | CREB-related factors{1.1.7}; ATF-6 factors{1.1.7.3} |
ATOH1_MOUSE.H10MO.C|M01017 | Atoh1 | rrCAGmTGGya | Mus musculus | Tal-related factors{1.2.3}; Neurogenin / Atonal-like factors{1.2.3.4} |
BACH1_HUMAN.H10MO.A|M01024 | BACH1 | tGCTGAGTCAbss | Homo sapiens | Jun-related factors{1.1.1}; NF-E2-like factors{1.1.1.2} |
BACH1_MOUSE.H10MO.C|M01018 | Bach1 | yGCTGASTCAyGsT | Mus musculus | Jun-related factors{1.1.1}; NF-E2-like factors{1.1.1.2} |
BATF_HUMAN.H10MO.A|M01030 | BATF | asTyyyrwwwTGAsTcAk | Homo sapiens | B-ATF-related factors{1.1.4}; B-ATF{1.1.4.0.1} |
BATF_HUMAN.H10MO.S|M01031 BATF_MOUSE.H10MO.B|M01020 | Batf | mTGAGTCAkw | Mus musculus | B-ATF-related factors{1.1.4}; B-ATF{1.1.4.0.1} |
BC11A_HUMAN.H10MO.C|M01032 | BCL11A | raaagrGGAAgtGrrar | Homo sapiens | Factors with multiple dispersed zinc fingers{2.3.4}; BCL11{2.3.4.15} |
BCL6_HUMAN.H10MO.C|M01034 | BCL6 | aardgcwTTCywgGAa | Homo sapiens | More than 3 adjacent zinc finger factors{2.3.3}; BCL6 factors{2.3.3.22} |
BCL6_MOUSE.H10MO.C|M01021 | Bcl6 | wTTCCTrGArAgc | Mus musculus | More than 3 adjacent zinc finger factors{2.3.3}; BCL6 factors{2.3.3.22} |
BHE40_HUMAN.H10MO.A|M01038 BHE40_MOUSE.H10MO.B|M01022 | BHLHE40 | kCACGTGAs | Homo sapiens Mus musculus | Hairy-related factors{1.2.4}; Hairy-like factors{1.2.4.1} |
PEBB_HUMAN.H10MO.C|M01431 PEBB_MOUSE.H10MO.C|M01287 | CBFB | yyTGYGGTywb | Homo sapiens Mus musculus | |
CDX1_HUMAN.H10MO.C|M01046 CDX1_MOUSE.H10MO.C|M01028 | CDX1 | aTTTAtGk | Homo sapiens Mus musculus | HOX-related factors{3.1.1}; CDX (Caudal type homeobox){3.1.1.9} |
CDX2_HUMAN.H10MO.C|M01047 CDX2_MOUSE.H10MO.C|M01029 | CDX2 | wTTTAyrr | Homo sapiens Mus musculus | HOX-related factors{3.1.1}; CDX (Caudal type homeobox){3.1.1.9} |
CDX4_MOUSE.H10MO.A|M01030 | Cdx4 | wgATTTATkgcy | Mus musculus | HOX-related factors{3.1.1}; CDX (Caudal type homeobox){3.1.1.9} |
CEBPA_HUMAN.H10MO.A|M01048 | CEBPA | wrTTgTGCAAymw | Homo sapiens | C/EBP-related{1.1.8}; C/EBP{1.1.8.1} |
CEBPA_MOUSE.H10MO.B|M01031 | Cebpa | trTTktGmAAta | Mus musculus | C/EBP-related{1.1.8}; C/EBP{1.1.8.1} |
CEBPB_HUMAN.H10MO.A|M01049 | CEBPB | krTTGCryMAym | Homo sapiens | C/EBP-related{1.1.8}; C/EBP{1.1.8.1} |
CEBPB_MOUSE.H10MO.A|M01032 | Cebpb | krTTGCrymAy | Mus musculus | C/EBP-related{1.1.8}; C/EBP{1.1.8.1} |
CEBPD_HUMAN.H10MO.B|M01050 CEBPD_MOUSE.H10MO.B|M01033 | CEBPD | rrTkryGcAAt | Homo sapiens Mus musculus | C/EBP-related{1.1.8}; C/EBP{1.1.8.1} |
CEBPE_HUMAN.H10MO.A|M01051 CEBPE_MOUSE.H10MO.A|M01034 | CEBPE | tTkcGmAATmty | Homo sapiens Mus musculus | C/EBP-related{1.1.8}; C/EBP{1.1.8.1} |
CEBPG_HUMAN.H10MO.C|M01052 CEBPG_MOUSE.H10MO.C|M01035 | CEBPG | aTKktGcAATctk | Homo sapiens Mus musculus | C/EBP-related{1.1.8}; C/EBP{1.1.8.1} |
CREB1_HUMAN.H10MO.A|M01064 | CREB1 | TkaCGTCAycr | Homo sapiens | CREB-related factors{1.1.7}; CREB-like factors{1.1.7.1} |
CREB1_MOUSE.H10MO.B|M01042 | Creb1 | gTGACGyma | Mus musculus | CREB-related factors{1.1.7}; CREB-like factors{1.1.7.1} |
CREM_HUMAN.H10MO.C|M01067 CREM_MOUSE.H10MO.C|M01043 | CREM | srvTGACGTCA | Homo sapiens Mus musculus | CREB-related factors{1.1.7}; CREB-like factors{1.1.7.1} |
CRX_HUMAN.H10MO.C|M01068 CRX_MOUSE.H10MO.S|M01045 | CRX | vrGATTAr | Homo sapiens | Paired-related HD factors{3.1.3}; OTX{3.1.3.17} |
CRX_MOUSE.H10MO.A|M01044 | Crx | wragrrGATTAr | Mus musculus | Paired-related HD factors{3.1.3}; OTX{3.1.3.17} |
CTCF_HUMAN.H10MO.A|M01070 | CTCF | ygrCCAsyAGrkGGCrsyrk | Homo sapiens | More than 3 adjacent zinc finger factors{2.3.3}; CTCF-like factors{2.3.3.50} |
CTCF_MOUSE.H10MO.A|M01046 | Ctcf | yggCCasyAGrGGGCRsyvk | Mus musculus | More than 3 adjacent zinc finger factors{2.3.3}; CTCF-like factors{2.3.3.50} |
CTCFL_HUMAN.H10MO.A|M01069 | CTCFL | ygrCCAsyAGrkGGCrsyv | Homo sapiens | More than 3 adjacent zinc finger factors{2.3.3}; CTCF-like factors{2.3.3.50} |
CUX1_HUMAN.H10MO.C|M01071 CUX1_MOUSE.H10MO.C|M01047 | CUX1 | rkrgsdATYGRTsk | Homo sapiens Mus musculus | HD-CUT factors{3.1.9}; CUX{3.1.9.2} |
DBP_HUMAN.H10MO.B|M01074 DBP_MOUSE.H10MO.B|M01049 | DBP | rTTaTGyAAya | Homo sapiens Mus musculus | C/EBP-related{1.1.8}; PAR factors{1.1.8.2} |
DDIT3_HUMAN.H10MO.C|M01075 DDIT3_MOUSE.H10MO.C|M01050 | DDIT3 | gggkATTGCAytb | Homo sapiens Mus musculus | C/EBP-related{1.1.8}; C/EBP{1.1.8.1} |
DLX3_HUMAN.H10MO.C|M01078 DLX3_MOUSE.H10MO.C|M01052 | DLX3 | gmTAATTrsw | Homo sapiens Mus musculus | NK-related factors{3.1.2}; DLX{3.1.2.5} |
E2F1_HUMAN.H10MO.A|M01086 E2F1_MOUSE.H10MO.A|M01053 | E2F1 | arwkGGCGsGAArr | Homo sapiens Mus musculus | E2F-related factors{3.3.2}; E2F{3.3.2.1} |
E2F2_HUMAN.H10MO.B|M01087 E2F2_MOUSE.H10MO.B|M01054 | E2F2 | gGSGCGmAwC | Homo sapiens Mus musculus | E2F-related factors{3.3.2}; E2F{3.3.2.1} |
E2F3_HUMAN.H10MO.B|M01088 E2F3_MOUSE.H10MO.B|M01055 | E2F3 | ssCGCsaMAc | Homo sapiens Mus musculus | E2F-related factors{3.3.2}; E2F{3.3.2.1} |
E2F4_HUMAN.H10MO.A|M01089 | E2F4 | wwwkGGCGsGAAar | Homo sapiens | E2F-related factors{3.3.2}; E2F{3.3.2.1} |
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