Database 'HOCOMOCO 10' (DNA Binding Motifs 1-50)

If you want to search for an specific entry use the Search Entry Form.
If you want to search for a protein sequence or a DNA motif use the Sequence Search Form.


Pages: 1,  23456789101112131415

AccessionsNamesConsensusOrganismsDescription and notes
AHR_HUMAN.H10MO.B|M01001
AHR_MOUSE.H10MO.B|M01001
AHRdtyGCGTGmHomo sapiens
Mus musculus
PAS domain factors{1.2.5}; Ahr-like factors{1.2.5.1}
AIRE_HUMAN.H10MO.C|M01002
AIRE_MOUSE.H10MO.C|M01002
AIREmttGGwwwwawtGGttwmHomo sapiens
Mus musculus
AIRE{5.3.1}; AIRE{5.3.1.0.1}
ALX1_HUMAN.H10MO.B|M01003
ALX1_MOUSE.H10MO.B|M01003
ALX1rTAATtrvATTAHomo sapiens
Mus musculus
Paired-related HD factors{3.1.3}; ALX{3.1.3.1}
ANDR_HUMAN.H10MO.A|M01006ARdGyACabwcTGTtCytkHomo sapiensSteroid hormone receptors (NR3){2.1.1}; GR-like receptors (NR3C){2.1.1.1}
ANDR_MOUSE.H10MO.B|M01004ArrGwACAbrryGTkCytMus musculusSteroid hormone receptors (NR3){2.1.1}; GR-like receptors (NR3C){2.1.1.1}
ARI5B_HUMAN.H10MO.C|M01013
ARI5B_MOUSE.H10MO.C|M01011
ARID5BksykdgTATTskrHomo sapiens
Mus musculus
ARID-related factors{3.7.1}; ARID5{3.7.1.5}
ARNT_HUMAN.H10MO.B|M01015
ARNT_MOUSE.H10MO.B|M01013
ARNTtyrCGTGcHomo sapiens
Mus musculus
PAS domain factors{1.2.5}; Arnt-like factors{1.2.5.2}
BMAL1_HUMAN.H10MO.C|M01040
BMAL1_MOUSE.H10MO.C|M01024
ARNTLkGrwCACGTGRCysHomo sapiens
Mus musculus
PAS domain factors{1.2.5}; Arnt-like factors{1.2.5.2}
ATF1_HUMAN.H10MO.B|M01018ATF1krTGAcKtmakHomo sapiensCREB-related factors{1.1.7}; CREB-like factors{1.1.7.1}
ATF1_MOUSE.H10MO.B|M01014Atf1vTGACGTsAsMus musculusCREB-related factors{1.1.7}; CREB-like factors{1.1.7.1}
ATF2_HUMAN.H10MO.B|M01019
ATF2_MOUSE.H10MO.B|M01015
ATF2rTGACGTmAHomo sapiens
Mus musculus
Jun-related factors{1.1.1}; ATF-2-like factors{1.1.1.3}
ATF3_HUMAN.H10MO.A|M01020
ATF3_MOUSE.H10MO.A|M01016
ATF3gTGAykymaHomo sapiens
Mus musculus
Fos-related factors{1.1.2}; ATF-3-like factors{1.1.2.2}
ATF6A_HUMAN.H10MO.B|M01021ATF6gkssTGACGTGGHomo sapiensCREB-related factors{1.1.7}; ATF-6 factors{1.1.7.3}
ATOH1_MOUSE.H10MO.C|M01017Atoh1rrCAGmTGGyaMus musculusTal-related factors{1.2.3}; Neurogenin / Atonal-like factors{1.2.3.4}
BACH1_HUMAN.H10MO.A|M01024BACH1tGCTGAGTCAbssHomo sapiensJun-related factors{1.1.1}; NF-E2-like factors{1.1.1.2}
BACH1_MOUSE.H10MO.C|M01018Bach1yGCTGASTCAyGsTMus musculusJun-related factors{1.1.1}; NF-E2-like factors{1.1.1.2}
BATF_HUMAN.H10MO.A|M01030BATFasTyyyrwwwTGAsTcAkHomo sapiensB-ATF-related factors{1.1.4}; B-ATF{1.1.4.0.1}
BATF_HUMAN.H10MO.S|M01031
BATF_MOUSE.H10MO.B|M01020
BatfmTGAGTCAkwMus musculusB-ATF-related factors{1.1.4}; B-ATF{1.1.4.0.1}
BC11A_HUMAN.H10MO.C|M01032BCL11AraaagrGGAAgtGrrarHomo sapiensFactors with multiple dispersed zinc fingers{2.3.4}; BCL11{2.3.4.15}
BCL6_HUMAN.H10MO.C|M01034BCL6aardgcwTTCywgGAaHomo sapiensMore than 3 adjacent zinc finger factors{2.3.3}; BCL6 factors{2.3.3.22}
BCL6_MOUSE.H10MO.C|M01021Bcl6wTTCCTrGArAgcMus musculusMore than 3 adjacent zinc finger factors{2.3.3}; BCL6 factors{2.3.3.22}
BHE40_HUMAN.H10MO.A|M01038
BHE40_MOUSE.H10MO.B|M01022
BHLHE40kCACGTGAsHomo sapiens
Mus musculus
Hairy-related factors{1.2.4}; Hairy-like factors{1.2.4.1}
PEBB_HUMAN.H10MO.C|M01431
PEBB_MOUSE.H10MO.C|M01287
CBFByyTGYGGTywbHomo sapiens
Mus musculus
CDX1_HUMAN.H10MO.C|M01046
CDX1_MOUSE.H10MO.C|M01028
CDX1aTTTAtGkHomo sapiens
Mus musculus
HOX-related factors{3.1.1}; CDX (Caudal type homeobox){3.1.1.9}
CDX2_HUMAN.H10MO.C|M01047
CDX2_MOUSE.H10MO.C|M01029
CDX2wTTTAyrrHomo sapiens
Mus musculus
HOX-related factors{3.1.1}; CDX (Caudal type homeobox){3.1.1.9}
CDX4_MOUSE.H10MO.A|M01030Cdx4wgATTTATkgcyMus musculusHOX-related factors{3.1.1}; CDX (Caudal type homeobox){3.1.1.9}
CEBPA_HUMAN.H10MO.A|M01048CEBPAwrTTgTGCAAymwHomo sapiensC/EBP-related{1.1.8}; C/EBP{1.1.8.1}
CEBPA_MOUSE.H10MO.B|M01031CebpatrTTktGmAAtaMus musculusC/EBP-related{1.1.8}; C/EBP{1.1.8.1}
CEBPB_HUMAN.H10MO.A|M01049CEBPBkrTTGCryMAymHomo sapiensC/EBP-related{1.1.8}; C/EBP{1.1.8.1}
CEBPB_MOUSE.H10MO.A|M01032CebpbkrTTGCrymAyMus musculusC/EBP-related{1.1.8}; C/EBP{1.1.8.1}
CEBPD_HUMAN.H10MO.B|M01050
CEBPD_MOUSE.H10MO.B|M01033
CEBPDrrTkryGcAAtHomo sapiens
Mus musculus
C/EBP-related{1.1.8}; C/EBP{1.1.8.1}
CEBPE_HUMAN.H10MO.A|M01051
CEBPE_MOUSE.H10MO.A|M01034
CEBPEtTkcGmAATmtyHomo sapiens
Mus musculus
C/EBP-related{1.1.8}; C/EBP{1.1.8.1}
CEBPG_HUMAN.H10MO.C|M01052
CEBPG_MOUSE.H10MO.C|M01035
CEBPGaTKktGcAATctkHomo sapiens
Mus musculus
C/EBP-related{1.1.8}; C/EBP{1.1.8.1}
CREB1_HUMAN.H10MO.A|M01064CREB1TkaCGTCAycrHomo sapiensCREB-related factors{1.1.7}; CREB-like factors{1.1.7.1}
CREB1_MOUSE.H10MO.B|M01042Creb1gTGACGymaMus musculusCREB-related factors{1.1.7}; CREB-like factors{1.1.7.1}
CREM_HUMAN.H10MO.C|M01067
CREM_MOUSE.H10MO.C|M01043
CREMsrvTGACGTCAHomo sapiens
Mus musculus
CREB-related factors{1.1.7}; CREB-like factors{1.1.7.1}
CRX_HUMAN.H10MO.C|M01068
CRX_MOUSE.H10MO.S|M01045
CRXvrGATTArHomo sapiensPaired-related HD factors{3.1.3}; OTX{3.1.3.17}
CRX_MOUSE.H10MO.A|M01044CrxwragrrGATTArMus musculusPaired-related HD factors{3.1.3}; OTX{3.1.3.17}
CTCF_HUMAN.H10MO.A|M01070CTCFygrCCAsyAGrkGGCrsyrkHomo sapiensMore than 3 adjacent zinc finger factors{2.3.3}; CTCF-like factors{2.3.3.50}
CTCF_MOUSE.H10MO.A|M01046CtcfyggCCasyAGrGGGCRsyvkMus musculusMore than 3 adjacent zinc finger factors{2.3.3}; CTCF-like factors{2.3.3.50}
CTCFL_HUMAN.H10MO.A|M01069CTCFLygrCCAsyAGrkGGCrsyvHomo sapiensMore than 3 adjacent zinc finger factors{2.3.3}; CTCF-like factors{2.3.3.50}
CUX1_HUMAN.H10MO.C|M01071
CUX1_MOUSE.H10MO.C|M01047
CUX1rkrgsdATYGRTskHomo sapiens
Mus musculus
HD-CUT factors{3.1.9}; CUX{3.1.9.2}
DBP_HUMAN.H10MO.B|M01074
DBP_MOUSE.H10MO.B|M01049
DBPrTTaTGyAAyaHomo sapiens
Mus musculus
C/EBP-related{1.1.8}; PAR factors{1.1.8.2}
DDIT3_HUMAN.H10MO.C|M01075
DDIT3_MOUSE.H10MO.C|M01050
DDIT3gggkATTGCAytbHomo sapiens
Mus musculus
C/EBP-related{1.1.8}; C/EBP{1.1.8.1}
DLX3_HUMAN.H10MO.C|M01078
DLX3_MOUSE.H10MO.C|M01052
DLX3gmTAATTrswHomo sapiens
Mus musculus
NK-related factors{3.1.2}; DLX{3.1.2.5}
E2F1_HUMAN.H10MO.A|M01086
E2F1_MOUSE.H10MO.A|M01053
E2F1arwkGGCGsGAArrHomo sapiens
Mus musculus
E2F-related factors{3.3.2}; E2F{3.3.2.1}
E2F2_HUMAN.H10MO.B|M01087
E2F2_MOUSE.H10MO.B|M01054
E2F2gGSGCGmAwCHomo sapiens
Mus musculus
E2F-related factors{3.3.2}; E2F{3.3.2.1}
E2F3_HUMAN.H10MO.B|M01088
E2F3_MOUSE.H10MO.B|M01055
E2F3ssCGCsaMAcHomo sapiens
Mus musculus
E2F-related factors{3.3.2}; E2F{3.3.2.1}
E2F4_HUMAN.H10MO.A|M01089E2F4wwwkGGCGsGAAarHomo sapiensE2F-related factors{3.3.2}; E2F{3.3.2.1}


Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.