footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

Database 'HumanTF 1.0' (Transcription Factors 351-400)

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Pages: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11

Accessions	Names	Organisms	Description and notes
PITX3_DBD	Homeobox protein PITX3, Paired-like homeodomain transcription factor 3, Pituitary homeobox PITX3, PITX3_HUMAN	Homo sapiens	Ensembl ID: ENSG00000107859; DNA-binding domain sequence; TF family: homeodomain; Clone MGC
PKNOX1_DBD	Homeobox protein PKNOX1, Homeobox protein PREP-1, PBX/knotted homeobox 1, PKNOX1,	Homo sapiens	Ensembl ID: ENSG00000160199; DNA-binding domain sequence; TF family: homeodomain+MEIS; Clone MGC
PKNOX2_DBD	Homeobox protein PKNOX2, Homeobox protein PREP-2, PBX/knotted homeobox 2, PKNOX2,	Homo sapiens	Ensembl ID: ENSG00000165495; DNA-binding domain sequence; TF family: homeodomain+MEIS; Clone Megaman
Pknox2_DBD	Homeobox protein PKNOX2, Homeobox protein PREP-2, PBX/knotted homeobox 2, Pknox2,	Mus musculus	Ensembl ID: ENSMUSG00000035934; DNA-binding domain sequence; TF family: homeodomain+MEIS; Clone Hughes lab.
POU1F1_DBD	GHF-1, Growth hormone factor 1, PIT-1, PIT1_HUMAN, Pituitary-specific positive transcription 1, POU1F1	Homo sapiens	Ensembl ID: ENSG00000064835; DNA-binding domain sequence; TF family: homeodomain+POU; Clone Gene synthesis
POU2F1_DBD	NF-A1, Oct-1, Octamer-binding protein 1, Octamer-binding transcription factor 1, OTF-1, POU domain, class 2, transcription factor 1, POU2F1	Homo sapiens	Ensembl ID: ENSG00000143190; DNA-binding domain sequence; TF family: homeodomain+POU; Clone MGC
POU2F2_DBD	Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2, Oct-2, Octamer-binding protein 2, Octamer-binding factor 2, OTF-2, PO2F2_HUMAN, POU domain, class 2, transcription factor 2, POU2F2	Homo sapiens	Ensembl ID: ENSG00000028277; DNA-binding domain sequence; TF family: homeodomain+POU; Clone Megaman
Pou2f2_DBD	Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2, Oct-2, Octamer-binding protein 2, Octamer-binding factor 2, OTF-2, PO2F2_MOUSE, POU domain, class 2, transcription factor 2, Pou2f2	Mus musculus	Ensembl ID: ENSMUSG00000008496; DNA-binding domain sequence; TF family: homeodomain+POU; Clone Hughes lab.
POU2F3_DBD POU5F1P1_DBD	Oct-11, Octamer-binding protein 11, Octamer-binding transcription factor 11, OTF-11, PO2F3_HUMAN, domain, class 2, transcription factor 3, POU2F3, Transcription factor PLA-1, Transcription factor Skn-1, Octamer-binding protein 3-like, Octamer-binding transcription factor 3-like, P5F1B_HUMAN, POU5F1P1, Putative POU domain, class 5, transcription factor 1B	Homo sapiens	Ensembl ID: ENSG00000137709; DNA-binding domain sequence; TF family: homeodomain+POU; Clone Gene synthesis, Ensembl ID: ENSG00000137709; DNA-binding domain sequence; TF family: homeodomain+POU; Clone source: Megaman
POU3F1_DBD	Oct-6, Octamer-binding protein 6, Octamer-binding transcription factor 6, OTF-6, PO3F1_HUMAN, domain transcription factor SCIP, POU domain, class 3, transcription factor 1, POU3F1	Homo sapiens	Ensembl ID: ENSG00000185668; DNA-binding domain sequence; TF family: homeodomain+POU; Clone Gene synthesis
POU3F2_DBD	Brain-2, Brain-specific homeobox/POU domain protein 2, Brn-2, Nervous system-specific octamer-binding factor N-Oct-3, Oct-7, Octamer-binding protein 7, Octamer-binding transcription factor 7, OTF-7, PO3F2_HUMAN, POU domain, class 3, transcription factor 2, POU3F2	Homo sapiens	Ensembl ID: ENSG00000184486; DNA-binding domain sequence; TF family: homeodomain+POU; Clone Gene synthesis
POU3F3_DBD	Brain-1, Brain-specific homeobox/POU domain protein 1, Brn-1, Oct-8, Octamer-binding protein Octamer-binding transcription factor 8, OTF-8, PO3F3_HUMAN, POU domain, class 3, transcription factor 3, POU3F3	Homo sapiens	Ensembl ID: ENSG00000198914; DNA-binding domain sequence; TF family: homeodomain+POU; Clone Gene synthesis
POU3F4_DBD	Brain-4, Brain-specific homeobox/POU domain protein 4, Brn-4, Oct-9, Octamer-binding protein Octamer-binding transcription factor 9, OTF-9, PO3F4_HUMAN, POU domain, class 3, transcription factor 4, POU3F4	Homo sapiens	Ensembl ID: ENSG00000196767; DNA-binding domain sequence; TF family: homeodomain+POU; Clone Gene synthesis
POU4F1_DBD	Brain-3A, Brain-specific homeobox/POU domain protein 3A, Brn-3A, Homeobox/POU domain protein Oct-T1, PO4F1_HUMAN, POU domain, class 4, transcription factor 1, POU4F1	Homo sapiens	Ensembl ID: ENSG00000152192; DNA-binding domain sequence; TF family: homeodomain+POU; Clone Gene synthesis
POU4F2_DBD	Brain-3B, Brain-specific homeobox/POU domain protein 3B, Brn-3B, PO4F2_HUMAN, POU domain, 4, transcription factor 2, POU4F2	Homo sapiens	Ensembl ID: ENSG00000151615; DNA-binding domain sequence; TF family: homeodomain+POU; Clone Gene synthesis
POU4F2_full	Brain-3B, Brain-specific homeobox/POU domain protein 3B, Brn-3B, PO4F2_HUMAN, POU domain, 4, transcription factor 2, POU4F2	Homo sapiens	Ensembl ID: ENSG00000151615; Full protein sequence; TF family: homeodomain+POU; Clone ArttuFL1
POU4F3_DBD	Brain-3C, Brain-specific homeobox/POU domain protein 3C, Brn-3C, PO4F3_HUMAN, POU domain, 4, transcription factor 3, POU4F3	Homo sapiens	Ensembl ID: ENSG00000091010; DNA-binding domain sequence; TF family: homeodomain+POU; Clone Gene synthesis
POU6F2_DBD	PO6F2_HUMAN, POU domain, class 6, transcription factor 2, POU6F2, Retina-derived domain factor 1, RPF-1	Homo sapiens	Ensembl ID: ENSG00000106536; DNA-binding domain sequence; TF family: homeodomain+POU; Clone Megaman
POU6F2_full	PO6F2_HUMAN, POU domain, class 6, transcription factor 2, POU6F2, Retina-derived domain factor 1, RPF-1	Homo sapiens	Ensembl ID: ENSG00000106536; Full protein sequence; TF family: homeodomain+POU; Clone Megaman
PRDM1_full	A8K0J1_HUMAN, cDNA FLJ76731, highly similar to Homo sapiens PR domain 1, with ZNF domain, PRDM1	Homo sapiens	Ensembl ID: ENSG00000057657; Full protein sequence; TF family: znfC2H2; Clone hORFeome
PRDM4_full	PRDM4, Q6NUK0_HUMAN	Homo sapiens	Ensembl ID: ENSG00000110851; Full protein sequence; TF family: znfC2H2; Clone GrLR3_A9_3.8
PROP1_DBD	Homeobox protein prophet of Pit-1, Pituitary-specific homeodomain factor, PROP-1, PROP1,	Homo sapiens	Ensembl ID: ENSG00000175325; DNA-binding domain sequence; TF family: homeodomain; Clone Megaman
PROP1_full	Homeobox protein prophet of Pit-1, Pituitary-specific homeodomain factor, PROP-1, PROP1,	Homo sapiens	Ensembl ID: ENSG00000175325; Full protein sequence; TF family: homeodomain; Clone hORFeome
PROX1_DBD	Homeobox prospero-like protein PROX1, Prospero homeobox protein 1, PROX-1, PROX1,	Homo sapiens	Ensembl ID: ENSG00000117707; DNA-binding domain sequence; TF family: Homeodomain+Prospero; Clone Megaman
PRRX1_DBD	Homeobox protein PHOX1, Paired mesoderm homeobox protein 1, Paired-related homeobox 1, PRRX1, PRRX1_HUMAN, PRX-1	Homo sapiens	Ensembl ID: ENSG00000116132; DNA-binding domain sequence; TF family: homeodomain; Clone Megaman
PRRX1_full	Homeobox protein PHOX1, Paired mesoderm homeobox protein 1, Paired-related homeobox 1, PRRX1, PRRX1_HUMAN, PRX-1	Homo sapiens	Ensembl ID: ENSG00000116132; Full protein sequence; TF family: homeodomain; Clone Megaman
PRRX2_full	Fragment, Predicted NUP98/PRRX2 fusion protein, PRRX2, Q5ISC7_HUMAN	Homo sapiens	Ensembl ID: ENSG00000167157; Full protein sequence; TF family: homeodomain; Clone hORFeome
Prrx2_DBD	Homeobox protein S8, Paired mesoderm homeobox protein 2, Prrx2, PRRX2_MOUSE,	Mus musculus	Ensembl ID: ENSMUSG00000039476; DNA-binding domain sequence; TF family: homeodomain; Clone Hughes lab.
RARA_DBD	PML-RARA-regulated adapter molecule 1, PRAM_HUMAN, PRAM-1, RARA	Homo sapiens	Ensembl ID: ENSG00000131759; DNA-binding domain sequence; TF family: Nuclear_Receptor; Clone MGC
RARA_full	PML-RARA-regulated adapter molecule 1, PRAM_HUMAN, PRAM-1, RARA	Homo sapiens	Ensembl ID: ENSG00000131759; Full protein sequence; TF family: Nuclear_Receptor; Clone Megaman
Rara_DBD	PML-RARA-regulated adapter molecule 1, PRAM_MOUSE, PRAM-1, Rara	Mus musculus	Ensembl ID: ENSMUSG00000037992; DNA-binding domain sequence; TF family: Nuclear_Receptor; Clone Hughes lab.
RARB_full	Fragment, Q86UC5_HUMAN, RARB, RARB protein	Homo sapiens	Ensembl ID: ENSG00000077092; Full protein sequence; TF family: Nuclear_Receptor; Clone hORFeome
Rarb_DBD	Nuclear receptor subfamily 1 group B member 2, RAR-beta, Rarb, Retinoic acid receptor beta	Mus musculus	Ensembl ID: ENSMUSG00000017491; DNA-binding domain sequence; TF family: Nuclear_Receptor; Clone Hughes lab.
RARG_DBD	E3VSK7_HUMAN, Fragment, NUP98/RARG fusion protein, RARG	Homo sapiens	Ensembl ID: ENSG00000172819; DNA-binding domain sequence; TF family: Nuclear_Receptor; Clone Megaman
RARG_full	E3VSK7_HUMAN, Fragment, NUP98/RARG fusion protein, RARG	Homo sapiens	Ensembl ID: ENSG00000172819; Full protein sequence; TF family: Nuclear_Receptor; Clone hORFeome
Rarg_DBD	Nuclear receptor subfamily 1 group B member 3, RAR-gamma, Rarg, Retinoic acid receptor gamma	Mus musculus	Ensembl ID: ENSMUSG00000001288; DNA-binding domain sequence; TF family: Nuclear_Receptor; Clone Hughes lab.
RAX_DBD	Intestine-specific homeobox, ISX_HUMAN, RAX, RAX-like homeobox	Homo sapiens	Ensembl ID: ENSG00000134438; DNA-binding domain sequence; TF family: homeodomain; Clone Gene synthesis
RAXL1_DBD	Q50-type retinal homeobox protein, RAX2_HUMAN, RAXL1, Retina and anterior neural homeobox protein 2, Retina and anterior neural fold homeobox-like protein 1	Homo sapiens	Ensembl ID: ENSG00000173976; DNA-binding domain sequence; TF family: homeodomain; Clone MGC
RFX2_DBD	DNA-binding protein RFX2, Regulatory factor X 2, RFX2, RFX2_HUMAN	Homo sapiens	Ensembl ID: ENSG00000087903; DNA-binding domain sequence; TF family: RFX; Clone Gene synthesis
Rfx2_DBD	DNA-binding protein RFX2, Regulatory factor X 2, Rfx2, RFX2_MOUSE	Mus musculus	Ensembl ID: ENSMUSG00000024206; DNA-binding domain sequence; TF family: RFX; Clone Hughes lab.
RFX3_DBD	Regulatory factor X 3, RFX3, RFX3_HUMAN, Transcription factor RFX3	Homo sapiens	Ensembl ID: ENSG00000080298; DNA-binding domain sequence; TF family: RFX; Clone MGC
Rfx3_DBD	Regulatory factor X 3, Rfx3, RFX3_MOUSE, Transcription factor RFX3	Mus musculus	Ensembl ID: ENSMUSG00000040929; DNA-binding domain sequence; TF family: RFX; Clone Hughes lab.
RFX4_DBD	Regulatory factor X 4, RFX4, RFX4_HUMAN, Testis development protein NYD-SP10, factor RFX4	Homo sapiens	Ensembl ID: ENSG00000111783; DNA-binding domain sequence; TF family: RFX; Clone Megaman
RFX5_DBD	DNA-binding protein RFX5, Regulatory factor X 5, RFX5, RFX5_HUMAN	Homo sapiens	Ensembl ID: ENSG00000143390; DNA-binding domain sequence; TF family: RFX; Clone Gene synthesis
Rhox11_DBD	Protein Rhox11, Q810N8_MOUSE, Reproductive homeobox 11, Reproductive homeobox on X 11, Rhox11	Mus musculus	Ensembl ID: ENSMUSG00000051038; DNA-binding domain sequence; TF family: homeodomain; Clone Hughes lab.
RHOXF1_DBD	Ovary-, testis- and epididymis-expressed gene protein, Paired-like homeobox protein PEPP-1, homeobox family member 1, RHOXF1, RHXF1_HUMAN	Homo sapiens	Ensembl ID: ENSG00000101883; DNA-binding domain sequence; TF family: homeodomain; Clone Gene synthesis
RHOXF1_full	Ovary-, testis- and epididymis-expressed gene protein, Paired-like homeobox protein PEPP-1, homeobox family member 1, RHOXF1, RHXF1_HUMAN	Homo sapiens	Ensembl ID: ENSG00000101883; Full protein sequence; TF family: homeodomain; Clone hORFeome
RORA_DBD	Nuclear receptor ROR-alpha, Nuclear receptor RZR-alpha, Nuclear receptor subfamily 1 F member 1, Retinoid-related orphan receptor-alpha, RORA, RORA_HUMAN	Homo sapiens	Ensembl ID: ENSG00000069667; DNA-binding domain sequence; TF family: Nuclear_Receptor; Clone Gene synthesis
RUNX2_DBD	Q32MY8_HUMAN, RUNX2	Homo sapiens	Ensembl ID: ENSG00000124813; DNA-binding domain sequence; TF family: RUNT; Clone Gene synthesis
RUNX3_DBD	Acute myeloid leukemia 2 protein, CBF-alpha-3, Core-binding factor subunit alpha-3, AML-2, PEA2-alpha C, PEBP2-alpha C, Polyomavirus enhancer-binding protein 2 alpha C subunit, Runt-related transcription factor 3, RUNX3, RUNX3_HUMAN, SL3-3 enhancer factor 1 alpha C subunit, SL3/AKV core-binding factor alpha C subunit	Homo sapiens	Ensembl ID: ENSG00000020633; DNA-binding domain sequence; TF family: RUNT; Clone MGC

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