footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

Database 'HumanTF 1.0' (Transcription Factors 301-350)

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Pages: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11

Accessions	Names	Organisms	Description and notes
NKX2-8_full	Homeobox protein NK-2 homolog H, Homeobox protein Nkx-2.8, NKX2-8, NKX28_HUMAN	Homo sapiens	Ensembl ID: ENSG00000136327; Full protein sequence; TF family: homeodomain; Clone hORFeome
NKX3-1_full	Homeobox protein NK-3 homolog A, Homeobox protein Nkx-3.1, NKX3-1, NKX31_HUMAN	Homo sapiens	Ensembl ID: ENSG00000167034; Full protein sequence; TF family: homeodomain; Clone Megaman
Nkx3-1_DBD	Homeobox protein NK-3 homolog A, Homeobox protein Nkx-3.1, Nkx3-1, NKX31_MOUSE	Mus musculus	Ensembl ID: ENSMUSG00000022061; DNA-binding domain sequence; TF family: homeodomain; Clone Hughes lab.
NKX3-2_DBD	Bagpipe homeobox protein homolog 1, Homeobox protein NK-3 homolog B, protein Nkx-3.2, NKX3-2, NKX32_HUMAN	Homo sapiens	Ensembl ID: ENSG00000109705; DNA-binding domain sequence; TF family: homeodomain; Clone Gene synthesis
NKX6-1_DBD	Homeobox protein NK-6 homolog A, Homeobox protein Nkx-6.1, NKX6-1, NKX61_HUMAN	Homo sapiens	Ensembl ID: ENSG00000163623; DNA-binding domain sequence; TF family: homeodomain; Clone Gene synthesis
NKX6-1_full	Homeobox protein NK-6 homolog A, Homeobox protein Nkx-6.1, NKX6-1, NKX61_HUMAN	Homo sapiens	Ensembl ID: ENSG00000163623; Full protein sequence; TF family: homeodomain; Clone Megaman
Nkx6-1_DBD	Homeobox protein NK-6 homolog A, Homeobox protein Nkx-6.1, Nkx6-1, NKX61_MOUSE	Mus musculus	Ensembl ID: ENSMUSG00000035187; DNA-binding domain sequence; TF family: homeodomain; Clone Hughes lab.
NKX6-2_DBD	Homeobox protein NK-6 homolog B, Homeobox protein Nkx-6.2, NKX6-2, NKX62_HUMAN	Homo sapiens	Ensembl ID: ENSG00000148826; DNA-binding domain sequence; TF family: homeodomain; Clone Gene synthesis
NKX6-2_full	Homeobox protein NK-6 homolog B, Homeobox protein Nkx-6.2, NKX6-2, NKX62_HUMAN	Homo sapiens	Ensembl ID: ENSG00000148826; Full protein sequence; TF family: homeodomain; Clone hORFeome
NOTO_DBD	NOTO, NOTO_HUMAN	Homo sapiens	Ensembl ID: ENSG00000214513; DNA-binding domain sequence; TF family: homeodomain; Clone Gene synthesis
NR2C2_DBD	NR2C2, Q6PHZ7_HUMAN	Homo sapiens	Ensembl ID: ENSG00000177463; DNA-binding domain sequence; TF family: Nuclear_Receptor; Clone Gene synthesis
NR2E1_full	cDNA FLJ16774 fis, clone BRCAN2019772, highly similar to Orphan nuclear NR2E1, NR2E1, Nuclear receptor subfamily 2 group E member 1, Nuclear receptor subfamily 2, group E, member 1, Nuclear receptor subfamily 2, group E, member 1, isoform CRA_b, Q6ZMP8_HUMAN	Homo sapiens	Ensembl ID: ENSG00000112333; Full protein sequence; TF family: Nuclear_Receptor; Clone hORFeome
Nr2e1_DBD	mTll, Nr2e1, NR2E1_MOUSE, Nuclear receptor subfamily 2 group E member Nuclear receptor TLX, Protein tailless homolog, Tll	Mus musculus	Ensembl ID: ENSMUSG00000019803; DNA-binding domain sequence; TF family: Nuclear_Receptor; Clone Hughes lab.
NR2F1_DBD	COT1_HUMAN, COUP transcription factor 1, COUP transcription factor I, COUP-TF COUP-TF1, EAR-3, NR2F1, Nuclear receptor subfamily 2 group F member 1, V-erbA-related protein 3	Homo sapiens	Ensembl ID: ENSG00000175745; DNA-binding domain sequence; TF family: Nuclear_Receptor; Clone Gene synthesis
NR2F1_full	COT1_HUMAN, COUP transcription factor 1, COUP transcription factor I, COUP-TF COUP-TF1, EAR-3, NR2F1, Nuclear receptor subfamily 2 group F member 1, V-erbA-related protein 3	Homo sapiens	Ensembl ID: ENSG00000175745; Full protein sequence; TF family: Nuclear_Receptor; Clone hORFeome
NR2F6_DBD	EAR-2, NR2F6, NR2F6_HUMAN, Nuclear receptor subfamily 2 group F member V-erbA-related protein 2	Homo sapiens	Ensembl ID: ENSG00000160113; DNA-binding domain sequence; TF family: Nuclear_Receptor; Clone MGC
NR2F6_full	EAR-2, NR2F6, NR2F6_HUMAN, Nuclear receptor subfamily 2 group F member V-erbA-related protein 2	Homo sapiens	Ensembl ID: ENSG00000160113; Full protein sequence; TF family: Nuclear_Receptor; Clone hORFeome
Nr2f6_DBD	COUP transcription factor 3, COUP-TF3, EAR-2, Nr2f6, NR2F6_MOUSE, Nuclear receptor 2 group F member 6, V-erbA-related protein 2	Mus musculus	Ensembl ID: ENSMUSG00000002393; DNA-binding domain sequence; TF family: Nuclear_Receptor; Clone Hughes lab.
NR3C1_DBD	GCR_HUMAN, Glucocorticoid receptor, GR, NR3C1, Nuclear receptor subfamily 3 group member 1	Homo sapiens	Ensembl ID: ENSG00000113580; DNA-binding domain sequence; TF family: Nuclear_Receptor; Clone Megaman
NR3C2_DBD	NR3C2, Q2NKL1_HUMAN	Homo sapiens	Ensembl ID: ENSG00000151623; DNA-binding domain sequence; TF family: Nuclear_Receptor; Clone Megaman
NR4A2_full	B7Z5U7_HUMAN, NR4A2	Homo sapiens	Ensembl ID: ENSG00000153234; Full protein sequence; TF family: Nuclear_Receptor; Clone hORFeome
NRF1_full	Alpha palindromic-binding protein, Alpha-pal, NRF-1, NRF1, NRF1_HUMAN, Nuclear respiratory factor	Homo sapiens	Ensembl ID: ENSG00000106459; Full protein sequence; TF family: NRF; Clone hORFeome
NRL_DBD	Neural retina-specific leucine zipper protein, NRL, NRL_HUMAN	Homo sapiens	Ensembl ID: ENSG00000129535; DNA-binding domain sequence; TF family: bZIP; Clone MGC
OLIG1_DBD	bHLHb6, bHLHe21, Class B basic helix-loop-helix protein 6, Class E helix-loop-helix protein 21, OLIG1, OLIG1_HUMAN, Oligo1, Oligodendrocyte transcription factor 1	Homo sapiens	Ensembl ID: ENSG00000184221; DNA-binding domain sequence; TF family: bHLH; Clone Gene synthesis
OLIG2_DBD	Fragment, OLIG2, OLIG2 protein, Q05BP9_HUMAN	Homo sapiens	Ensembl ID: ENSG00000205927; DNA-binding domain sequence; TF family: bHLH; Clone MGC
OLIG2_full	Fragment, OLIG2, OLIG2 protein, Q05BP9_HUMAN	Homo sapiens	Ensembl ID: ENSG00000205927; Full protein sequence; TF family: bHLH; Clone hORFeome
OLIG3_DBD	bHLHb7, bHLHe20, Class B basic helix-loop-helix protein 7, Class E helix-loop-helix protein 20, OLIG3, OLIG3_HUMAN, Oligo3, Oligodendrocyte transcription factor 3	Homo sapiens	Ensembl ID: ENSG00000177468; DNA-binding domain sequence; TF family: bHLH; Clone MGC
ONECUT1_DBD	Hepatocyte nuclear factor 6, HNF-6, HNF6_HUMAN, One cut domain family 1, One cut homeobox 1, ONECUT1	Homo sapiens	Ensembl ID: ENSG00000169856; DNA-binding domain sequence; TF family: homeodomain+cut; Clone Gene synthesis
ONECUT1_full	Hepatocyte nuclear factor 6, HNF-6, HNF6_HUMAN, One cut domain family 1, One cut homeobox 1, ONECUT1	Homo sapiens	Ensembl ID: ENSG00000169856; Full protein sequence; TF family: homeodomain+cut; Clone hORFeome
ONECUT2_DBD	Hepatocyte nuclear factor 6-beta, HNF-6-beta, OC-2, One cut domain family 2, One cut homeobox 2, ONEC2_HUMAN, ONECUT2, Transcription factor ONECUT-2	Homo sapiens	Ensembl ID: ENSG00000119547; DNA-binding domain sequence; TF family: homeodomain+cut; Clone Gene synthesis
ONECUT3_DBD	OC-3, One cut domain family member 3, One cut homeobox ONEC3_HUMAN, ONECUT3, Transcription factor ONECUT-3	Homo sapiens	Ensembl ID: ENSG00000205922; DNA-binding domain sequence; TF family: Homeodomain+cut; Clone Gene synthesis
OTX1_DBD	Homeobox protein OTX1, Orthodenticle homolog 1, OTX1, OTX1_HUMAN	Homo sapiens	Ensembl ID: ENSG00000115507; DNA-binding domain sequence; TF family: homeodomain; Clone MGC
Otx1_DBD	Homeobox protein OTX1, Orthodenticle homolog 1, Otx1, OTX1_MOUSE	Mus musculus	Ensembl ID: ENSMUSG00000005917; DNA-binding domain sequence; TF family: homeodomain; Clone Gene synthesis
OTX2_DBD	Homeobox protein OTX2, Orthodenticle homolog 2, OTX2, OTX2_HUMAN	Homo sapiens	Ensembl ID: ENSG00000165588; DNA-binding domain sequence; TF family: homeodomain; Clone hDBD_G
PAX1_DBD	HuP48, Paired box protein Pax-1, PAX1, PAX1_HUMAN	Homo sapiens	Ensembl ID: ENSG00000125813; DNA-binding domain sequence; TF family: PAX; Clone Gene synthesis
PAX2_DBD	PAX2, PAX2_HUMAN	Homo sapiens	Ensembl ID: ENSG00000075891; DNA-binding domain sequence; TF family: PAX; Clone Gene synthesis
PAX3_DBD	HuP2, Paired box protein Pax-3, PAX3, PAX3_HUMAN	Homo sapiens	Ensembl ID: ENSG00000135903; DNA-binding domain sequence; TF family: PAX+Homeodomain; Clone Gene synthesis
PAX4_DBD	PAX4, PAX4_HUMAN	Homo sapiens	Ensembl ID: ENSG00000106331; DNA-binding domain sequence; TF family: PAX+Homeodomain; Clone Gene synthesis
PAX4_full	PAX4, PAX4_HUMAN	Homo sapiens	Ensembl ID: ENSG00000106331; Full protein sequence; TF family: PAX+Homeodomain; Clone Megaman
PAX5_DBD	B-cell-specific transcription factor, BSAP, Paired box protein Pax-5, PAX5, PAX5_HUMAN	Homo sapiens	Ensembl ID: ENSG00000196092; DNA-binding domain sequence; TF family: PAX; Clone Gene synthesis
PAX6_DBD	Aniridia type II protein, Oculorhombin, Paired box protein Pax-6, PAX6,	Homo sapiens	Ensembl ID: ENSG00000007372; DNA-binding domain sequence; TF family: PAX+Homeodomain; Clone Gene synthesis
PAX7_DBD	HuP1, Paired box protein Pax-7, PAX7, PAX7_HUMAN	Homo sapiens	Ensembl ID: ENSG00000009709; DNA-binding domain sequence; TF family: PAX+Homeodomain; Clone Gene synthesis
PAX7_full	HuP1, Paired box protein Pax-7, PAX7, PAX7_HUMAN	Homo sapiens	Ensembl ID: ENSG00000009709; Full protein sequence; TF family: PAX+Homeodomain; Clone hORFeome
PAX9_DBD	PAX9, PAX9_HUMAN	Homo sapiens	Ensembl ID: ENSG00000198807; DNA-binding domain sequence; TF family: PAX; Clone Gene synthesis
PDX1_DBD	Glucose-sensitive factor, GSF, IDX-1, Insulin promoter factor 1, Insulin upstream 1, IPF-1, Islet/duodenum homeobox-1, IUF-1, Pancreas/duodenum homeobox protein 1, PDX-1, PDX1, PDX1_HUMAN, Somatostatin-transactivating factor 1, STF-1	Homo sapiens	Ensembl ID: ENSG00000139515; DNA-binding domain sequence; TF family: homeodomain; Clone Synt_2
PHOX2A_DBD	Fragment, PHOX2A, Phox2a protein, Q96KQ2_HUMAN	Homo sapiens	Ensembl ID: ENSG00000165462; DNA-binding domain sequence; TF family: homeodomain; Clone MGC
PHOX2B_DBD	NBPhox, Neuroblastoma Phox, Paired mesoderm homeobox protein 2B, Paired-like homeobox PHOX2B, PHOX2B homeodomain protein, PHX2B_HUMAN	Homo sapiens	Ensembl ID: ENSG00000109132; DNA-binding domain sequence; TF family: homeodomain; Clone MGC
PHOX2B_full	NBPhox, Neuroblastoma Phox, Paired mesoderm homeobox protein 2B, Paired-like homeobox PHOX2B, PHOX2B homeodomain protein, PHX2B_HUMAN	Homo sapiens	Ensembl ID: ENSG00000109132; Full protein sequence; TF family: homeodomain; Clone hORFeome
PITX1_DBD	Hindlimb-expressed homeobox protein backfoot, Homeobox protein PITX1, Paired-like homeodomain transcription 1, Pituitary homeobox 1, PITX1, PITX1_HUMAN	Homo sapiens	Ensembl ID: ENSG00000069011; DNA-binding domain sequence; TF family: homeodomain; Clone Gene synthesis
PITX1_full	Hindlimb-expressed homeobox protein backfoot, Homeobox protein PITX1, Paired-like homeodomain transcription 1, Pituitary homeobox 1, PITX1, PITX1_HUMAN	Homo sapiens	Ensembl ID: ENSG00000069011; Full protein sequence; TF family: homeodomain; Clone hORFeome

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.

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