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structure nameCRYSTAL STRUCTURE OF THE SV40 LARGE T-ANTIGEN ORIGIN BINING DOMAIN BOUND TO SITE I DNA
(LARGE T ANTIGEN)
referenceG.MEINKE et al. J.VIROL. V. 87 2923 2013
sourceSIMIAN VIRUS 40
experimentX-ray (resolution=3.20, R-factor=0.188)
structural superfamilyOrigin of replication-binding domain, RBD-like;
sequence familyOrigin of replication binding protein;
multimeric complexes2itl_AB 2ntc_AB 4fgn_AB 4gdf_AB 4gdf_EF 5d9i_AB 5tct_ABCEF
reference complex2itl_B
links to other resourcesPDBSum NPIDB BIPA PDIdb DNAproDB
protein sequence
interface signatureSNRTR

Estimated binding specificities ?

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# IC=5.336 IC/col=0.889 n_of_columns=6 specificity:   
A |  69   0   0  10  11   9
C |   9   0  96  86   9  78
G |   9  96   0   0   9   9
T |   9   0   0   0  67   0
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updated Tue May 8 22:15:45 2018