6wc5_CDN : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A TERNARY MEF2B/NKX2-5/MYOCARDIN ENHANCER DNA COMPLEX
reference	Chen et al. J.Mol.Biol. 432 5499 2020
source	HOMO SAPIENS
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	SRF-like;
reference complex	1n6j_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6wc5_C interface=2,14,22, gRkkiqisrildqRnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr > 6wc5_D interface=2,18,22, gRkkiqisrildqrnrqVtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr > 6wc5_N interface=3,44,45,48,49,52, kpRvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvKIwfQNrrYksk
interface signature	RRK/RVK/RKIQNY

Estimated binding specificities ?

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# IC=9.597 IC/col=0.640 n_of_columns=15

specificity:

A |   6   4   0   6   0   0   4  24  24  24  24  24   4  86   0
C |   4  79   0   4   4  96  68  24  24  24  24  24   9   0   0
G |   4   9   0   4   1   0   6  24  24  24  24  24   6   9  96
T |  82   4  96  82  91   0  18  24  24  24  24  24  77   1   0

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updated Sat Dec 16 20:29:37 2023