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legend  pdf

structure nameTHE COMPLEX STRUCTURE OF HSROSR-SG (VNG0258/ROSR-SG)
(hsRosR-DNA binding protein)
referenceKutnowski et al. 'Nucleic 47 8860 2019
sourceHalobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
experimentX-ray (resolution=2.68, R-factor=0.241)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyTranscriptional regulator PadRlike family;
multimeric complexes6qfd_AB 6qh0_AB 6qh0_CD 6qil_AB 6qil_CD 6qua_AB 6qua_CD
reference complex6qil_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureLNHRYPR

Estimated binding specificities ?

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# IC=5.032 IC/col=0.719 n_of_columns=7 specificity:   
A |   8  19  54  24   0   0   0
C |  78  17  17  24   0   0   0
G |   8  17   8  24   0  96   0
T |   2  43  17  24  96   0  96
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updated Mon Dec 18 17:38:24 2023