interface graph thumbnail
legend  pdf

structure nameTHE COMPLEX STRUCTURE OF HSROSR-S5 (VNG0258H/ROSR-S5)
(hsRosR DNA binding protein)
referenceKutnowski et al. 'Nucleic 47 8860 2019
sourceHalobacterium salinarum NRC-1
experimentX-ray (resolution=2.44, R-factor=0.241)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyTranscriptional regulator PadRlike family;
multimeric complexes6qfd_AB 6qh0_AB 6qh0_CD 6qil_AB 6qil_CD 6qua_AB 6qua_CD
reference complex6qil_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureLNHRYPR

Estimated binding specificities ?

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# IC=4.747 IC/col=0.678 n_of_columns=7 specificity:   
A |  78   6  96  24   6   6   6
C |   6  78   0  24   6   6  78
G |   6   6   0  24   6   6   6
T |   6   6   0  24  78  78   6
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updated Mon Dec 18 17:37:22 2023