interface graph thumbnail
legend  pdf

structure nameTHE COMPLEX STRUCTURE OF HSROSR-S4 (VNG0258/ROSR-S4)
(DNA-binding protein)
referenceKutnowski et al. 'Nucleic 47 8860 2019
sourceHalobacterium salinarum NRC-1
experimentX-ray (resolution=2.13, R-factor=0.211)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyTranscriptional regulator PadRlike family;
multimeric complexes6qfd_AB 6qh0_AB 6qh0_CD 6qil_AB 6qil_CD 6qua_AB 6qua_CD
reference complex6qil_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureLNHRYPR

Estimated binding specificities ?

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# IC=3.627 IC/col=0.605 n_of_columns=6 specificity:   
A |  73   9  24   0   7   7
C |   9  73  24   0   7   9
G |   7   7  24   0  75   7
T |   7   7  24  96   7  73
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updated Mon Dec 18 17:37:13 2023