interface graph thumbnail
legend  pdf

structure nameCRYO-EM STRUCTURE OF BACTERIAL RNA POLYMERASE-SIGMA54 HOLOENZYME TRANSCRIPTION OPEN COMPLEX
(RNA POLYMERASE SIGMA-54 FACTOR,RNA POLYMERASE SIGMA-54...)
referenceZhang et al. 'Mol. 70 1111 2018
sourceKLEBSIELLA PNEUMONIAE
experimentX-ray (resolution=3.40, R-factor=0.272)
sequence familySigma54, DNA binding domain; Sigma54 factor, core binding domain;
redundant complexes6gh6 6gfw
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  EALGPG--------------------------------------              +-----------------------6gh5_M    
                                                         +--1 
  --------------------------------DTRGRCTTKTRT   L     +-2  +-----------------------2o9l_A    
                                                       ! ! 
  ------QA----------NG------------------------       +-3 +--------------------------7k63_U    
                                                     ! ! 
  --------------------ETNTSCRGHCRT------------   L --4 +---------------------------5d4s_B    
                                                     ! 
  --------STVCKGDCRG--------------------------   L   +----------------------------1w0t_A    
                                                   

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updated Mon Dec 18 15:17:52 2023