6b0q_A : 3D-footprint complex

structure name	ZINC FINGER DOMAIN OF WT1(-KTS FORM) WITH 13+1MER OLIGONUCLEOTIDE WITH 3' TRIPLET TGT (Wilms tumor protein)
reference	Horton et al. 'Nucleic 46 3864 2018
source	Homo sapiens
experiment	X-ray (resolution=2.79, R-factor=0.226)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	2jpa_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6b0q_A interface=48,50,51,54,76,77,78,79,106,108,109,112, hmrpfmcaypgcnkryfklshlqmhsrkhtgekpyqcdfkdcerrfsRsDQlkRhqrrhtgvkpfqcktcqrkfsRSDHlkthtrthtgekpfscrwpscqkkfaRsDElvRhhnmhqr
interface signature	RDQRRSDHRDER

Estimated binding specificities ?

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# IC=10.749 IC/col=1.075 n_of_columns=10

specificity:

A |  64   0  10   0   0   0  96   0   0   0
C |  12  96  10  96  96  96   0  96   0  74
G |  10   0  12   0   0   0   0   0  96  12
T |  10   0  64   0   0   0   0   0   0  10

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updated Mon Dec 18 14:29:02 2023