5w43_AB : 3D-footprint complex

structure name	STRUCTURE OF THE TWO-COMPONENT RESPONSE REGULATOR RCSB-DNA COMPLEX
reference	Center for Structural Genomics of Infectious Diseases (CSGID)
source	Escherichia coli str. K-12 substr. MG1655
experiment	X-ray (resolution=3.15, R-factor=?)
structural superfamily	CheY-like;C-terminal effector domain of the bipartite response regulators;
reference complex	5w43_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5w43_A interface=172,173,174,176,177,178, nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkgkkftpesvsrllekidkrlspkesevlrlfaegflvteiakklnrsIKTiSSQkksammklgvendiallnylssvt > 5w43_B interface=166,167,168,170,171,172, nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkpesvsrllekikrlspkesevlrlfaegflvteiakklnrsIKTiSSQkksammklgvendiallnylss
interface signature	IKTSSQ/IKTSSQ

Estimated binding specificities ?

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# IC=12.126 IC/col=0.866 n_of_columns=14

specificity:

A |   0  33   0   0  96  42  24  24  24   0   0   0   0  96
C |   0  21   0   0   0  10  24  24  24   0  96   0   0   0
G |   0  21  96  96   0  21  24  24  24   0   0   0   0   0
T |  96  21   0   0   0  23  24  24  24  96   0  96  96   0

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updated Sat Dec 16 06:30:23 2023