interface graph thumbnail
legend  pdf

structure nameTEAD1 BOUND TO DNA
(Transcriptional enhancer factor TEF-1)
referenceMorgunova et al. 'To ? ? ?
sourceHomo sapiens
experimentX-ray (resolution=3.29, R-factor=0.203)
structural superfamilyHomeodomain-like;
multimeric complexes5no6_AN 5no6_BI
reference complex5no6_N
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRKSSQV

Estimated binding specificities ?

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# IC=6.864 IC/col=0.858 n_of_columns=8 specificity:   
A |   6  20  16  70   0   0   0   0
C |  75   5  55   0   0   0  96  90
G |   5  55   5  15   0   0   0   5
T |  10  16  20  11  96  96   0   1
scan!

Related DNA sequences reported in the literature ?


sitesourcematches (E-value)
term: TEAD1
GGAATGPubMed5nnx_A(8.75e-11)

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updated Mon Dec 18 13:25:29 2023