| structure name | 1.98A STRUCTURE OF GSK945237 WITH S.AUREUS DNA GYRASE AND SINGLY NICKED DNA (DNA GYRASE SUBUNIT A) |
| reference | Miles et al. Bioorg.Med.Chem.Lett. 26 2464 2016 |
| source | STAPHYLOCOCCUS AUREUS (STRAIN N315) / STAPHYLOCOCCUS AUREUS (STRAIN N315) |
| experiment | X-ray (resolution=1.98, R-factor=0.166) |
| structural superfamily | Type II DNA topoisomerase; |
| sequence family | DNA gyrase/topoisomerase IV, subunit A; |
| multimeric complexes | 5cdm_AB 5cdm_CD 5cdn_AB 5cdn_CD 5cdn_RS 5cdn_TU 5cdo_ABCD 5cdo_RSTU 5cdp_AB 5cdp_CD 5cdq_ABCD 5cdq_RSTU 5cdr_AB 5cdr_CD 5iwi_AB 5iwi_CD 5iwm_ABCD 6fqm_ABCD 6fqm_abcd 6fqv_ABCD 6fqv_RSTU 6qtk_ABCD 6qtp_ABCD 6qx1_ABCD |
| redundant complexes | 5cdp_A 5cdq_R 5cdr_A 5iwm_C 6fqv_T 6qx1_A 5cdm 5cdn 5cdo 6fqm 6qtk 6qtp |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format------------SA------------RG----IG------------------------ +--2xcr_U ! YC----------SG------------RT----IG------------------------ +-------3 +5iwi_C ! ! +-1 ------------SA------------RG----IG--QT-------------------- L ! +--2 +5npk_d +---4 ! ----RC------AT------------------IC--------------RG-------- L ! ! +2xkk_C +-5 ! YT----------ST--------------RA--IG------------------------ ! ! +----------5bs8_A +-6 ! --------------------------------------------------LAECDAKG ! ! +--------------6n1p_A +-7 ! ----RC------ST------------------IA------------------------ ! ! +----------------3ksb_B +-8 ! ------------SA----------------EGIGSC---------------------- ! ! +------------------3l4j_A +------9 ! ----------QAAG------------------IGAG---------------------- L ! ! +--------------------5zen_A +-10 ! --DC--------------------------ECIGSG---------------------- L ! ! +---------------------4fm9_A +-11 ! ------QA--------------------NG---------------------------- ! ! +----------------------------7k63_U +-12 ! --------RC------------------------------------------------ ! ! +----------------------------7cow_T -13 ! --------------NASTRGHTSTLT-------------------------------- L ! +----------------------------7cby_C ! --------------------------------------TAFCAGRCFA---------- L +----------------------------6dg0_A |
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updated Tue Dec 19 10:40:31 2023