structure nameSTRUCTURE OF BACTEROIDES SP PIF1 COMPLEXED WITH TAILED DSDNA RESULTING IN SSDNA BOUND COMPLEX
(Uncharacterized protein)
referenceBharath et al. 'Cell 14 2030 2016
sourceBacteroides sp. 2_1_16
experimentX-ray (resolution=2.00, R-factor=0.180)
structural superfamilyP-loop containing nucleoside triphosphate hydrolases;
multimeric complexes6l3g_AB
redundant complexes6l3g_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHPFYRVKEHSLHHFC

Estimated binding specificities ?

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# IC=8.765 IC/col=1.096 n_of_columns=8 specificity:   
A |   0   0   0   0   0  24   0   4
C |   0   0   0   0   0  24  96   4
G |   0   0   0   0   0  24   0  81
T |  96  96  96  96  96  24   0   7
scan!

Dendrogram of similar interfaces ?

matrix format

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updated Tue Dec 19 10:24:17 2023