| structure name | CRYSTAL STRUCTURE OF DNA2 IN COMPLEX WITH A 5' OVERHANG DNA (DNA replication ATP-dependent helicasenuclease DNA2) |
| reference | Pavletich et al. Elife 4 ? 2015 |
| source | Mus musculus |
| experiment | X-ray (resolution=2.36, R-factor=0.209) |
| structural superfamily | P-loop containing nucleoside triphosphate hydrolases; |
| sequence family | DNA replication factor Dna2; |
| redundant complexes |  5eax_A
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | TMTYSDRRYKMLVLR |
Estimated binding specificities ?
| contact |  |
A | 0 0 0 9 0 24 24 24 21 96 0 19 60 C | 0 96 0 9 96 24 24 24 21 0 0 20 12 G | 0 0 0 67 0 24 24 24 33 0 96 38 12 T | 96 0 96 11 0 24 24 24 21 0 0 19 12scan! |
Dendrogram of similar interfaces ?
matrix format------------------------------------------------------------QT--------------YT--DT------RT-- +--------------------4n0o_E +----3 ------------------------------------------------------RC----------QT------------------------ +-5 +--------------------6m6b_M ! ! ------------------------------------------------------------------------------KG--HC-------- +-6 +-------------------------7nvv_7 ! ! --------------------------------------------------FARA--------KC---------------------------- ! +---------------------------7aud_E ! ------------------------------------------------TT------------------------------HT---------- +-7 +---------------3gpl_A ! ! +--------2 --------------------------------------------------------------------VT--PT----------FT------ L ! ! ! ! +6s3h_A ! +----4 +--------------1 ----------------------------------------------------------YC----RT----VT--KT----HTHTFTCT---- L +-8 ! +5fhd_A ! ! ! ------------------------------------------------------------------------------------------YT ! ! +------------------------6p4f_C +-9 ! --------------------------------KTKTSC--FT-------------------------------------------------- ! ! +-----------------------------5zyt_D +-10 ! ------------------------------KT------YT--PTEAKT-------------------------------------------- ! ! +-----------------------------7mi4_C +-11 ! RTTTKTTTATNTTTFTATFTNT---------------------------------------------------------------------- L ! ! +-----------------------------6bhx_B -12 ! NT----TTAT------TTWTRTITYTETRT-------------------------------------------------------------- L ! +-----------------------------6irq_A ! --------------------------------------------------------SG---------------------------------- +-----------------------------7enn_K |
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updated Tue Dec 19 10:17:48 2023