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legend  pdf

structure nameSTRUCTURE OF THE SU(H)-HAIRLESS-DNA REPRESSOR COMPLEX
(SUPPRESSOR OF HAIRLESS PROTEIN)
referenceKovall et al. 'Plos 14 e1002509 2016
sourceDROSOPHILA MELANOGASTER
experimentX-ray (resolution=2.14, R-factor=0.174)
structural superfamilyDNA-binding protein LAG-1 CSL;p53-like transcription factors;E set domains;
sequence familyBetatrefoil; LAG1, DNA binding; IPT/TIG domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYERSKRS

Estimated binding specificities ?

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# IC=5.807 IC/col=0.968 n_of_columns=6 specificity:   
A |  13   0   0   0  96  13
C |  13  96  96  96   0  57
G |  16   0   0   0   0  13
T |  54   0   0   0   0  13
scan!

Related DNA sequences reported in the literature ?


sitesourcematches (E-value)
term: HAIRLESS
TGTGGGAAPubMed5e24_E(6.34e-03)

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updated Tue Dec 19 10:17:08 2023