interface graph thumbnail
legend  pdf

structure nameNGTET1 IN COMPLEX WITH 5MC DNA IN SPACE GROUP P3221
(Tet-like dioxygenase)
referenceHashimoto et al. 'Nucleic 43 10713 2015
sourceNaegleria gruberi
experimentX-ray (resolution=2.69, R-factor=0.194)
structural superfamilyRegulatory protein AraC;
redundant complexes4lt5_A 5cg8_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  ----SGMG--------QG                             +5cg9_A    
                                     +-----------1 
  KC--SGMG--------QG       +---------2           +4lt5_A    
                           !         ! 
  --HC--------------   L --3         +-----------7w5p_A    
                           ! 
  --------KASAHCKC--   L   +---------------------5zmd_G    
                         

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updated Tue Dec 19 10:10:08 2023