5b7j_A : 3D-footprint complex

structure name	STRUCTURE MODEL OF SAP1-DNA COMPLEX
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5b7j_A interface=2,58,59,60,62,63,66, aKaqrthlsleekiklmrlvvrhkhelvdrktsefyakiarigyedeglaihtesacRNQiISimRvyeqrlahrqpgmkttpeedeldqlcdewkarlselqqyrekflv
interface signature	KRNQISR

Estimated binding specificities ?

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# IC=6.292 IC/col=0.899 n_of_columns=7

specificity:

A |  73  73  73   7  96  96   0
C |   9   7   9  75   0   0   0
G |   7   7   7   7   0   0   0
T |   7   9   7   7   0   0  96

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Dendrogram of similar interfaces ?

matrix format

  
  ----------YTVC--KGDC--KC--   L                      +----------2qhb_A    
                                        +-------------2 
  --RT------STVCKGDC--RG----   L        !             +----------1w0t_A    
                                   +----3 
  --RT------------VA--QTNA--   L   !    !                      +-5hod_A    
                                 --4    +----------------------1 
  RC--RT----------NC--STNARG   L   !                           +-1mnm_C    
                                   ! 
  ------LTNTHGTAYTRG--------   L   +-----------------------------2efw_A

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updated Tue Dec 19 10:00:03 2023