interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF 5'- CTTATAAATTTATAAG IN A HOST-GUEST COMPLEX
(reverse transcriptase)
referenceGeorgiadis et al. 'J. 137 6947 2015
sourceMoloney murine leukemia virus (isolate Shinnick) / Moloney murine leukemia virus (isolate Shinnick)
experimentX-ray (resolution=1.68, R-factor=0.217)
structural superfamilyDNA/RNA polymerases;
sequence familyReverse transcriptase RNAdependent DNA pol;
multimeric complexes1qai_AB 6b1s_AB
redundant complexes2fjw 5vbs 3fsi 4hkq 2fvr 2fjv 1ztw 2r2u 2fvs 1d0e 1ztt 1qai 4m94 4xo0 2fjx 2fvp 4m95 1qaj 1d1u 4xpe 2r2s 2r2r 6b1s 2r2t 1i6j 2fvq
reference complex6mih_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  YC--LGPCVC----DGRT------------                                +---4xpc_A    
                                                  +-------------1 
  --------------------YCFC--YTLC             +----2             +---4ol8_E    
                                             !    ! 
  ----------RALA----ICYGQAPCYGMG   L   +-----4    +-----------------5d3g_A    
                                       !     ! 
  --------------------------YA--       !     !   +------------------6ar1_D    
                                     --5     +---3 
  ----------------------QG------   L   !         +------------------6d6v_A    
                                       ! 
  --WG--------------------------       +----------------------------2xhb_A    
                                     

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updated Mon Dec 18 11:34:11 2023