| structure name | CRYSTAL STRUCTURE OF THE MOT1 N-TERMINAL DOMAIN IN COMPLEX WITH TBP AND NC2 BOUND TO A PROMOTER DNA FRAGMENT (TATA-BINDING PROTEIN-ASSOCIATED PHOSPHOPROTEIN) | |
| reference | Hopfner et al. Elife 4 ? 2015 | |
| source | ENCEPHALITOZOON CUNICULI | |
| experiment | X-ray (resolution=3.78, R-factor=0.236) | |
| structural superfamily | Histone-fold; | |
| sequence family | Histonelike transcription factor CBF/; | |
| multimeric complexes | 4wzs_ABD | |
| links to other resources | NAKB  PDIdb DNAproDB | |
| site | source | matches (E-value) |
|---|---|---|
| term: TBP | ||
| TATAAAAG | PubMed | 4wzs_ABD(1.10e-13) |
| TATAAA | PubMed | 4wzs_ABD(1.19e-08) |
| TGTAAA | PubMed | 4wzs_ABD(3.30e-04) |
| GGGTATAAAAGG | PubMed | 4wzs_ABD(3.37e-10) |
| TATAA | PubMed | 4wzs_ABD(3.62e-06) |
| CTTTT | PubMed | 4wzs_ABD(3.63e-06) |
| AATAAAAG | PubMed | 4wzs_ABD(2.06e-09) |
| TATATA | PubMed | 4wzs_ABD(3.30e-04) |
| CATAAA | PubMed | 4wzs_ABD(3.91e-05) |
| TATTTAAA | PubMed | 4wzs_ABD(6.57e-03) |
| TAAAAA | PubMed | 4wzs_ABD(3.91e-05) |
| TATATAA | PubMed | 4wzs_ABD(6.03e-06) |
| site | source | matches (E-value) |
Dendrogram of similar interfaces ?
matrix format------RT +7lyb_G +----------------1 ------RA ! +6t7a_C --3 RAETRT-- ! +--4ne1_p +--------------2 ------RT +--1u35_G |
home
updated Tue Dec 19 09:38:57 2023