structure namePROTEIN DOMAIN COMPLEX WITH SSDNA
(Gamma-interferon-inducible protein 16)
referenceSongying et al. 'J 8 51 2016
sourceHomo sapiens
experimentX-ray (resolution=2.54, R-factor=0.239)
structural superfamilyHIN-2000 domain-like;
sequence familyHIN200/IF120x domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  ----------------RA------------------------------------------------                                +3rnu_B    
                                                                                         +----------1 
  --DGTGFGYGKTYTKG--DG--DGDGYGTG------LGKGPG--RGRGSG----------STHTYT   L              +--3          +2i0q_A    
                                                                                      !  ! 
  KGFG----------------YT------------YG------------STHT------------HT   L           +--4  +----------3kjp_A    
                                                                                   !  ! 
  --------------------YG--------------------------EG----------NG--HG       +-------5  +-------------3u58_C    
                                                                           !       ! 
  ----------------------------KT--TTWT--------------KT--FT--STFTST--   L --6       +----------------4gnx_Z    
                                                                           ! 
  ----------------------------------------------------KTFTNTQT------   L   !                      +-6i52_B    
                                                                           +----------------------2 
  --------------------YT--------HALT--------RG------KTQGFG----------   L                          +-6lbr_A    
                                                                         

home
updated Tue Dec 19 09:21:42 2023