4ne1_g : 3D-footprint complex

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	HUMAN MHF1 MHF2 DNA COMPLEXES (CENTROMERE PROTEIN S)
reference	Sachpatzidis et al. 'Nat 5 2987 2014
source	HOMO SAPIENS
experiment	X-ray (resolution=6.50, R-factor=0.267)
structural superfamily	Histone-fold;
multimeric complexes	4ndy_IKLM 4ndy_QTUV 4ne1_IKf 4ne1_LMj 4ne1_QTUV 4ne1_Wknop 4ne1_hi
redundant complexes	4ndy
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4ne1_g interface=97, syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanleRkaqkkkks

  
  --------RT                    +7lya_E    
                   +------------3 
  --------RT       !            +7zs9_e    
                   ! 
  IT------RA       !            +7k78_E    
                 --7      +-----4 
  --------RT       ! +----5     +7wlr_E    
                   ! !    ! 
  --RAETRT--       ! !    +------4ne1_p    
                   +-6 
  --------RT         !             +1u35_G    
                     !           +-1 
  --------RT         +-----------2 +7lyb_G    
                                 ! 
  --------RA                     +6t7a_C

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updated Thu Dec 22 20:31:37 2022