4lll_IJ : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX
reference	Brennan et al. 'Nucleic 42 2774 2014
source	STAPHYLOCOCCUS AUREUS
experiment	X-ray (resolution=3.04, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4lln_I
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4lll_I interface=58,60,61,63,64,85, ftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq > 4lll_J interface=59,61,62,64,65, eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtrrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq
interface signature	TPTSNR/TPTSN

Estimated binding specificities ?

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# IC=11.684 IC/col=0.730 n_of_columns=16

specificity:

A |   2   0  24  24   2   0  96   2  77  24  24  20   3   0  96  70
C |   3   0  24  24   8   0   0   3   8  24  24  18  89   0   0   8
G |   2   0  24  24   8   0   0  89   3  24  24  16   2   0   0  10
T |  89  96  24  24  78  96   0   2   8  24  24  42   2  96   0   8

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updated Fri Dec 15 20:05:40 2023