4lll_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX
reference	Brennan et al. 'Nucleic 42 2774 2014
source	STAPHYLOCOCCUS AUREUS
experiment	X-ray (resolution=3.04, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4lln_I
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4lll_C interface=59,61,62,64,65,86, eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq > 4lll_D interface=58,60,61,63,64,85, ftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq
interface signature	TPTSNR/TPTSNR

Estimated binding specificities ?

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# IC=10.542 IC/col=0.555 n_of_columns=19

specificity:

A |   0  24  24   9   4  96  24  24  24  24   0   5   0  86  66  24  24  92  92
C |   0  24  24   6   3   0  24  24  24  24   4  62   0   3  16  24  24   1   3
G |   0  24  24  16   3   0  24  24  24  24   0  16   0   4   8  24  24   3   1
T |  96  24  24  65  86   0  24  24  24  24  92  13  96   3   6  24  24   0   0

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updated Fri Dec 15 20:05:13 2023