structure name | CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA TRANSCRIPTIONAL REGULATOR PA2196 BOUND TO ITS OPERATOR DNA (Transcriptional regulator) |
reference | Choe et al. Biochem.Biophys.Res.Commun. 440 317 2013 |
source | Pseudomonas aeruginosa |
experiment | X-ray (resolution=2.90, R-factor=0.200) |
structural superfamily | Tetracyclin repressor-like, C-terminal domain;Homeodomain-like; |
sequence family | Bacterial regulatory proteins, tetR family; |
multimeric complexes | 4l62_ABCD 4l62_EFGH 4l62_IJKL 4l62_MNOP |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | LKSYH |
Estimated binding specificities ?
contact |
A | 9 0 9 24 66 81 C | 7 0 73 24 7 1 G | 73 0 7 24 9 7 T | 7 96 7 24 14 7scan! |
Dendrogram of similar interfaces ?
matrix formatLG----KG--STYTHT L +-4l62_M ! LC--RTPTPTSTYT-- L +-------------3 +6nsn_B ! ! +-1 ----TTRG----YTWA L ! +-2 +7jnp_A +-6 ! VT--AGDT--TTYTLA L ! ! +5gpc_B ! ! ----TCKGAG--YTHA --7 +---------------5k7z_A ! LTRG--PTAC--YT-- L ! +---------3lsr_A ! +---4 ----TGKG----YCFA L +---5 +---------4pxi_B ! MTRGTGPT--ATYTWT L +-------------5yej_B |
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updated Tue Dec 19 09:04:42 2023