interface graph thumbnail
legend  pdf

structure nameTCAR-SSDNA COMPLEX CRYSTAL STRUCTURE REVEALS THE NOVEL SSDNA BINDING MECHANISM OF THE MARR FAMILY PROTEINS
referenceY.M.CHANG et al. NUCLEIC ACIDS RES. V. 42 5314 2014
sourceSTAPHYLOCOCCUS EPIDERMIDIS
experimentX-ray (resolution=3.60, R-factor=?)
structural superfamily"Winged helix" DNA-binding domain;
reference complex4kdp_B
links to other resourcesPDBSum NPIDB BIPA PDIdb DNAproDB
protein sequence
interface signatureSKRKQR/SEKRRK

Estimated binding specificities ?

contactlogo
# IC=6.675 IC/col=0.607 n_of_columns=11 specificity:   
A |   4   0   9  96   9  19   0  24  24  24  88
C |  81   0  67   0  11  38   0  24  24  24   4
G |   4  96  11   0  67  19  96  24  24  24   2
T |   7   0   9   0   9  20   0  24  24  24   2
scan!

home
updated Wed Jun 30 22:33:19 2021